Planococcus sp. PAMC 21323: Plano_0015
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Entry
Plano_0015 CDS
T03510
Name
(GenBank) RNA polymerase factor sigma-70
KO
K27000
RNA polymerase sigma-H factor
Organism
pln
Planococcus sp. PAMC 21323
Brite
KEGG Orthology (KO) [BR:
pln00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pln03021
]
Plano_0015
Transcription machinery [BR:
pln03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Plano_0015
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
GerE
HTH_23
MSP1_C
HTH_38
HTH_30
Sigma70_ECF
Sigma70_r4
DUF6674
COG4_N
HTH_16
HTH_28
HTH_Tnp_Tc3_1
Motif
Other DBs
NCBI-ProteinID:
AIY03980
UniProt:
A0A0B4R7R9
LinkDB
All DBs
Position
14235..14885
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AA seq
216 aa
AA seq
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MENYDQVQTQRFTDMTDEELVSLVHSGNTEALDFLITKFRPFVRMKARSYFLIGADKEDI
IQEGMIGLYKAIRDFKSDKLSSFRAFAELCIIRQIITAIKTATRQKHIPLNSYISLDKPI
YDEESDRTLMDVLTGNGVDDPEDLIIHNEEFQYMEEKMGEVLSELEREVLALYLDGQSYQ
EISEKLERHVKSIDNALQRVKRKLERHLQVNEMPSS
NT seq
651 nt
NT seq
+upstream
nt +downstream
nt
gtggaaaattatgatcaagttcagacccaacgattcaccgacatgacagatgaggaactt
gtcagtttagtccacagtggaaacacagaagcactggattttttgataacaaagttccgt
ccttttgtacgaatgaaagcccggtcgtatttcctgattggtgctgataaagaagatatt
attcaagaaggcatgattggtttatacaaggcgatacgggattttaagagcgataaatta
tcttcattccgtgcgttcgcagaattatgcattatccggcaaatcattaccgccattaaa
acggcaacacgccaaaagcatattccactgaattcatatatttccttggacaagccgatt
tacgatgaagagtctgatcgaacgttaatggatgtattaaccggaaacggcgtagacgac
ccggaagatttaattattcataatgaagagtttcagtatatggaagagaaaatgggcgaa
gtactcagcgagttagaacgagaagtgctcgcgctttatcttgacggtcaatcctatcaa
gaaatctcagaaaagcttgagcgtcatgtgaaatcgattgataatgccttgcagcgagtc
aagcggaaactagaacgtcatttgcaggttaatgagatgccaagctcttga
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