Perognathus longimembris pacificus (Pacific pocket mouse): 125347982
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Entry
125347982 CDS
T08928
Symbol
Rph3a
Name
(RefSeq) rabphilin-3A
KO
K19938
rabphilin-3A
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
plop04131
]
125347982 (Rph3a)
Membrane trafficking [BR:
plop04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
125347982 (Rph3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2
FYVE_2
PI3K_C2
OmpH
FYVE_CARP1-2
C1_1
zf-piccolo
HD_5
JetD_C
Motif
Other DBs
NCBI-GeneID:
125347982
NCBI-ProteinID:
XP_048196878
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All DBs
Position
3:complement(85060700..85098445)
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AA seq
700 aa
AA seq
DB search
MTDTAVRSSSNRWMYPSDRPLQSNDKEQLQAGWSVHPGAQTDRQRKQEELTDEEKEIINR
VIARAEKMEEMEQERIGRLVDRLENMRKNVAGDGVNRCILCGEQLGMLGSACVVCEDCKK
NVCTKCGVETANNRPHPVWLCKICLEQREVWKRSGAWFFKGFPKQVLPQPMPITRSKPLQ
PGSELPASEQPTSEPKPVVRSSTRGDTEDRRSLGQKTGPDLAPGRGSYGPPVRRASEAQM
NTSPRDPDGRDVSHSGGSGDTSRGPAGLRRANSVQASRQTPASGPSPGPPPPTQPGPPGG
GRAPPAPAGRFPEQRPEGTPSDPGHPGATVPPREERTGAAEGFVVAGAREDRAAHPPGRY
SQVPVASAQPAPTSTRKPPPPEEDEEEANSYDSDEATTLGALEFSLLYEQDNSSLQCTII
KAKGLKPMDSNGLADPYVKLHLLPGASKSNKLRTKTLRNTRNPVWNETLVYHGITDEDMQ
RKTLRISVCDEDKFGHNEFIGETRFSLKKLKPNQRKNFNICLERVIPMKRAGTTGSARGM
ALYEEEQVERLGDVEERGKILVSLMYSTQQGGLIVGIVRCVHLAAMDANGYSDPFVKLWL
KPDMGKKAKHKTQIKKKTLNPEFNEEFFYDIKHSDLAKKSLDISVWDYDIGKSNDYIGGC
QLGISAKGERLKHWYECLKNKDKKIERWHQLQNENHVSSD
NT seq
2103 nt
NT seq
+upstream
nt +downstream
nt
atgactgacactgcggtccgcagtagttccaaccgctggatgtaccccagcgaccggccc
ctgcaatccaatgataaggaacagctacaagcaggctggtccgtccatcctggtgcccag
acagacagacagaggaagcaagaagagctgactgatgaggagaaggaaatcatcaacaga
gtcatcgctcgggctgagaagatggaagagatggagcaggagcggattgggcgcctggtg
gaccggctggagaacatgaggaagaacgtggcgggggatggcgtgaaccgatgcatcctg
tgcggggagcagctgggcatgctgggctcagcctgtgtggtgtgtgaggactgcaagaag
aatgtgtgcaccaaatgtggggtggagactgccaacaaccgcccgcacccggtgtggctc
tgcaaaatctgcctggagcagcgggaggtgtggaagcgatctggagcatggttcttcaag
ggcttccccaaacaggtcctcccacagcccatgcctataacgaggagcaagcccctgcag
ccaggcagtgagctgcctgcctcggagcaacccacctcagaacccaagccggtagtccga
tcttcaactcgaggtgacactgaggatagaaggagcctcggtcagaagacaggccccgac
ctggctcctgggcgtgggagctatgggcctccagtgcgcagggcctccgaggcccagatg
aacacatcaccccgggatccagatggccgggatgtcagccacagtgggggctctggggac
accagccgtggcccagcagggttgaggcgggccaactcagttcaagcctccagacagacc
ccagcctcggggccaagcccagggccccctccacccacccagccagggccccccgggggc
ggcagagccccgccagcgccagcaggacgctttccagagcagaggccagaggggactccc
agtgaccctggccacccaggggccaccgtgccaccacgggaggagaggacgggggcagcc
gagggcttcgtcgtggcgggagccagggaggaccgggcagcccacccgccaggccgttat
tcccaagtccctgtggcctctgcccagccagcccccacctccacccgcaagcctccacct
cctgaggaggacgaggaggaggccaacagctatgactctgatgaagcaaccaccctgggt
gccctggagttcagccttctctatgagcaggacaatagctccctgcagtgcaccatcatc
aaggccaagggactgaagcccatggactccaatggcctggctgatccctacgtcaagctg
cacctccttccaggggccagcaagtccaacaagctccgcacaaagaccctacggaacacg
cggaacccggtgtggaatgagaccctagtgtaccacggcatcaccgacgaggacatgcag
aggaagacactcaggatctctgtgtgtgatgaggacaagtttggccacaatgagttcatc
ggggagaccaggttctcactcaagaaactgaagcctaaccagaggaagaatttcaacatc
tgcctggagcgggtgatccccatgaagcgtgcaggaaccacaggctcagcccgcggcatg
gccctctatgaggaggagcaggtggagcgcctcggggatgtggaggagcgtgggaagatc
ctggtgtccctgatgtacagcacgcagcagggcggcctcatcgtaggcattgtgcgttgc
gtgcacctggccgccatggacgccaacggctactcagatccatttgtcaagctgtggctg
aaaccggacatggggaagaaagccaagcacaagactcagatcaaaaagaaaactctgaac
cctgaatttaatgaggagtttttctatgacatcaaacacagcgacctggcaaagaagtca
ctggacatctcggtgtgggactacgacatcggcaagtccaacgactacatcggaggctgc
cagctggggatctccgccaagggcgagcgcttgaaacattggtacgagtgtctgaaaaac
aaggacaagaagatcgagcgctggcaccagctacagaacgagaaccacgtgtcaagcgac
tag
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