Perognathus longimembris pacificus (Pacific pocket mouse): 125357065
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Entry
125357065 CDS
T08928
Symbol
Tubgcp6
Name
(RefSeq) gamma-tubulin complex component 6
KO
K16573
gamma-tubulin complex component 6
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
plop03036
]
125357065 (Tubgcp6)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
plop04812
]
125357065 (Tubgcp6)
Chromosome and associated proteins [BR:
plop03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
gamma-tubulin ring complex
125357065 (Tubgcp6)
Cytoskeleton proteins [BR:
plop04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Gamma-tubulin complex components
125357065 (Tubgcp6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GCP6_N
GCP_C_terminal
GCP_N_terminal
DUF4573
Motif
Other DBs
NCBI-GeneID:
125357065
NCBI-ProteinID:
XP_048209680
LinkDB
All DBs
Position
1:572213..588127
Genome browser
AA seq
1799 aa
AA seq
DB search
MASITQLFDDLCEALLPATRARPGLRCVDRRRARQTLKRVAYNALFTNLFQEDARRPRSS
LSKLPVKNKVLMMSFDLRVGGLGPEADRLEELVEELLQAAPGCPFVEVGSVLELLVQLAG
SGPPQILRRKRDYFNKNAGRNVPYRGYDCDDLSVSEMDVRSLISREGSLCHSMIQETLQV
MEAAPGTHLPIMGHFSFGDPCDKFERDSRVSLFGALVHCRTYDMDVRLDLPPVPDSADLS
GLAIKVPQSMDQWEDEGFQSASNLTPDSQSEPSMTPDVDLWEVALTYEASKRRCWERIGC
PPGHREEPYLTEAGRDAFDRFCRLRQGELQLLSGGLLQAARPVLVKESELVKDSLNVLLG
VVSATFSLCQPAQAFVVQRGVHVAGTSPESICSILSQVAEYGTHYMRLSHFSLQPAQGSV
CSRGLVFQAFTSGLRRYLQYYRACVLSTPPTLSLLTIGFLFKKLGRQLRYLAELCGVGTA
LPGTTGGETRAAFPTGVKLLSYLYQEALDNCSNEHYPVLLALLKTSCAPYTQFIHDWVYS
GVFRDVYGEFMIQVNQEYLGCRDKFYWTHGYVLISKEVEDCVPVFLKHIAHDVYICGKTI
NLLKLCCPRHYLCWSDVPVPRISVIFSLKELKEIEKDCAVYVGRMERVARYNSISKEEKE
LRMEIAKQELIVHAREAASRVLSELSDRRVSEQMALDARKREQFQRLKEQFVKYQERLLA
ARQEELDDDLSPAHELHDREKRLKALEEELEKKARQALVDHYSKLSAEAAHREQKALWKI
ERHRLESARLRFLLEDQKRIQGMLRDRSEAGQPQEMLDSLPMAHAQVTSLESELRDEGCG
HEAGPTEQQAKQDCPSRPRSPTPQPLMAQTVGADGSISEQVEGAEPFSASLSIADFLLVE
SGSEQAVQGGGAPLLEEALQTICSDLTPAVPEQAPIVTAPHATPLDYDFSTVLRPAVATS
TSPGLLQALQGGLGSVPKLDDCAYNTQKPLPHLLRRVIPEADSSQPMQQILELMVEATAP
TEDCPSGMAPSRPRWNVHGHASDANISVGENVSDVAPSRPRWNVHGHASDASIRVGENVS
DVAPSRPRWNVHGHASDASIRVGENVSDVAPSRPRWNVHGHASDASIRVGENVSDVAPSR
PRWNVHGHASDASIRVGENVSDVAPSRPRWNVHGHASDASISVGENVSDVALSWPHRNVH
GHASDASIRVGENVSDVAPSRPCQNVHGHALDVSLRVGENMSDVAPQPHQDTPECTSQSC
KILGVLSPKTEPQTPSSLQSPCHMFQSGPPLEAHSSALECGTQLPEEMGPATSPSSPSIV
EGSLQTKPPAVAEPRVPEDHIPQEPGPGENGDNEDLSPSLSKNSQEETVSPASPGLGEEV
EDTDAEAEARRREEEQAYLAGLVRLYHVEPYPDNYESLSEPPLAHLVHHVLPRAFALPVD
PQIQSAVDETVVQLSELLTLPVLMKRSLTAPLAAHVSLVNKAAVDYFFVELHLEAHFEAL
RHFLLMEDGEFAQSLSDLLFEKLGAGQTPGELLNPLVLNCVLSKALQYSLHGDTPHAANL
SFALKYLPEAFAPNTPDVLSCLELRYKVDWPLNIVITESCLSKYSGIFSFLLQLKLMMWT
LKDVCFHLKRTALVSHVARSVQFRQLQLFKHEMQHFVKVIQGYIANQILHVSWCEFRARL
AAVGDLEEIQRAHAEYLHRAVFRGLLTEKAAPVMNIIHSIFSLVLKFRSQLISQAWSPTS
GPQGVEHPNFALMQQSYSTFKYYSHFLFKVVTKLVNRGYQPHLEDFLLRINFNSYYQDS
NT seq
5400 nt
NT seq
+upstream
nt +downstream
nt
atggccagcatcactcagctgttcgacgatctgtgcgaagccctcctgcccgccacccgg
gctcgccccggcctgcgctgcgtggaccggaggagggcgaggcagaccctcaagagggtg
gcctacaatgccctgttcacaaacctttttcaggaagacgctcgtcggccgcggtccagc
ctgtccaaactcccagtgaaaaacaaggtcctcatgatgtcctttgacttgagagtgggt
ggcctgggcccggaggctgaccgcttggaggagctcgtggaggagctgctgcaggcagcc
cctggctgtccgtttgtggaagtgggatcggtgttggaactcctggttcagctggcaggc
agcggccctcctcaaatactgcgcaggaaacgagactactttaataaaaatgcaggtaga
aacgttccctacagaggctacgattgtgatgacctcagtgtgtctgagatggacgtccgg
tctctgatctccagagaagggtctctgtgtcacagcatgatccaggaaacactgcaggtg
atggaggctgctccagggacccacttgcccatcatggggcacttttctttcggtgaccct
tgtgacaagtttgagagagacagtcgggtgtcactttttggtgccctggttcactgccgc
acttacgacatggatgtgcgactagacctgcccccagtgccagacagcgcagacctctct
ggactggccattaaggtcccccagagcatggatcagtgggaagatgaagggtttcagtca
gcatccaatttgactcctgattcccagtctgaaccaagcatgaccccagatgtggacctg
tgggaagttgcgctcacctatgaggccagcaagcggaggtgttgggagcgaattggatgt
cctcctggccacagagaagagccctacctcaccgaggccggcagggacgccttcgacagg
ttctgtaggctccgccaaggggagctacagttactcagtgggggtctcctgcaggccgca
aggcctgtgctagtgaaggagagtgagctggtgaaggattcactgaacgtccttcttgga
gttgtttctgccacattttccctctgccagccggctcaagctttcgtggtgcagcggggc
gtccatgtggcaggcacctcgcctgagagcatctgtagcatcctctcccaggtggccgag
tacgggacccactacatgcgcctgagccacttttccctgcagcctgcccagggctctgtg
tgcagcagaggccttgtgttccaggccttcaccagcggcttgaggaggtacctgcagtat
taccgggcctgcgtcctctctactccacctaccttgagccttctcacaattggctttctc
ttcaagaagctgggcaggcagctcaggtacctagctgagctctgtggtgttggcactgcc
ctcccggggactactggaggagagaccagggctgcattcccgactggagtgaagttgctg
tcctacctctaccaggaggcactggacaactgcagtaatgagcactaccctgtgctgctg
gccctgctgaagaccagctgtgcaccctacacacagttcatccacgactgggtatacagc
ggcgttttcagagatgtttatggggagttcatgatccaggtgaaccaggagtacctcggc
tgcagagacaaattctactggacccatggctacgtgctcatttccaaagaggtggaggac
tgtgtccctgtgtttctgaagcatattgctcatgatgtgtacatctgcgggaagaccatc
aacctgctgaagctctgctgtccccggcactacctctgttggtctgatgtccctgtccct
cgcatctcggtgattttctccctcaaggagttgaaggagattgagaaggactgtgctgtc
tatgttgggcgaatggagagggtggcccgttacaactctatcagcaaggaggagaaggaa
ttacgtatggaaattgccaaacaagagctaattgtccatgctcgggaagcagcatccagg
gttctgagcgagctaagtgaccgccgggtgtctgaacagatggccttggatgctcggaag
cgggagcagtttcagcgactgaaggaacaatttgtgaagtaccaggagcgactcctggca
gccagacaggaggagctggatgatgacctgagccctgcccatgagctccacgaccgtgag
aagagactgaaagccctggaggaggagctggagaagaaggccaggcaggcgctggtggac
cattatagcaagttgtctgcagaggcagctcatcgggagcaaaaagcgctgtggaagatc
gagagacaccgcttggaaagtgcgcgacttcgcttcctcctagaagatcagaagcgaatc
caggggatgctgagagaccggtctgaagctggtcagccccaggaaatgctggatagtctc
cccatggcacatgcccaggtcacatctctggaatctgagctccgtgatgaaggctgtggc
cacgaagcaggtcccacagaacagcaggccaagcaggactgcccaagtaggccacgttca
cccacaccacagcccctcatggctcagacagtgggggctgatggctccatctctgaacag
gtagagggggccgaaccattttctgcttccctcagcattgcagacttcttgcttgtggaa
tcagggtctgagcaggctgtgcagggtgggggagcccccctcctagaggaagcactgcag
accatctgctcagacctcacccctgcagtgcctgagcaggcgcccatagtgactgctcct
cacgccaccccactggattatgacttcagtactgtcttgaggccagctgtggccacttca
acttcaccagggctcttgcaggctctccagggtggcttaggcagtgtaccgaaactggat
gattgtgcctataacacccagaagcctctgcctcacttgctcaggcgtgtcatccctgag
gcagatagcagtcagcccatgcagcagattcttgagcttatggtggaggctactgcaccc
acagaggactgtccttctggcatggctccgtcccggccacgttggaacgtccacggacat
gcatcggatgccaacatcagcgttggggagaacgtgtctgacgtggctccgtcccggcca
cgttggaacgtccacggacatgcatcggatgccagcatcagggttggggagaacgtgtcc
gacgtggctccgtcccggccacgttggaacgtccacggacatgcatcggatgccagcatc
agagttggggagaacgtgtccgatgtggctccgtcccggccacgctggaacgtccacgga
catgcatcggatgccagcatcagggttggggagaacgtgtccgacgtggctccgtcccgg
ccacgctggaacgtccacggacatgcatcggatgccagcatcagggttggggagaatgtg
tctgacgtggctccgtcccggccacgttggaacgtccacggacatgcatcggatgccagc
atcagcgttggggagaacgtgtccgacgtggctctgtcctggccacatcggaacgtgcac
ggacatgcatcggatgccagcatcagggttggggagaacgtatccgacgtggctccatcc
cggccatgtcagaacgtgcacggacatgcattggatgtcagcctcagggttggggagaac
atgtcagatgtggctcctcaaccacatcaggacacccctgagtgcacctctcagtcctgc
aagattctgggggtgctttctccaaaaactgagccccaaacccccagctccctgcagagt
ccttgccacatgttccagtcaggccctcccctggaagcacacagctctgctctggagtgt
gggacacagctgcctgaagaaatggggcctgccacctctccctcaagcccaagtattgtg
gaaggcagcttgcagaccaagccccctgctgtggctgagcccagggttccagaagaccac
attcctcaagagccaggcccaggggagaatggagacaacgaggacctgtctccaagcctg
tccaagaactcacaggaagagacagtgagcccagctagcccaggccttggtgaggaggtg
gaggacacggatgcggaggcagaggcccggcgccgggaggaggagcaggcctacctggca
ggccttgtcaggctctatcacgtggagccatacccggacaactacgagtccctgtcagag
cctcctcttgcccacctggtgcaccacgtgcttccccgggcctttgccctccctgtggac
ccccagatccagtcagctgtggatgagactgtggtccagctgagcgagctgctgacgttg
ccagtgctcatgaagcgctccctcacggcacccctggctgcccacgtctccttggtgaac
aaagctgcagtcgactacttctttgtggaattgcacctggaggcgcactttgaggcgctg
cggcacttcctgctgatggaggatggggagttcgcccagtcccttagcgacctgctcttt
gagaagctcggggcagggcagacccccggagagctgctcaaccctctggtcctcaactgc
gtcctgagcaaggcgctgcagtacagcctccacggggacaccccacacgcagccaacctg
tcctttgccctcaagtacctgcccgaggcttttgcccccaacaccccggatgtgctgagt
tgcctggagctcaggtacaaggttgactggcccctcaacattgtcatcacggagagctgc
ctgagcaagtacagcggcatcttctccttcctgctgcagctgaagctcatgatgtggacg
ctgaaggacgtctgcttccacctcaagcgcacagctctggtgagccacgtggcccgctct
gtgcagttccgccagctgcagctgttcaagcacgagatgcagcactttgtgaaggtcatc
cagggctacattgccaaccagatcctgcacgtcagctggtgcgagttcagggcccggctg
gccgcagtgggtgaccttgaggagatccagcgtgcgcatgcggagtacctgcacagagct
gtcttccgaggcctgctgacagagaaggcagcacccgtcatgaacatcatccacagcatc
ttcagcctggtgctcaagttccggagccagctcatctctcaggcctggagccccaccagt
ggaccccaaggcgtggaacaccccaacttcgctctcatgcagcagtcctacagtaccttc
aagtactattcccactttctcttcaaagtggttaccaagctggtgaaccgaggctaccag
ccccacctggaagacttcctactgcgaatcaacttcaacagctactatcaggattcctga
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integrated database retrieval system
