Perognathus longimembris pacificus (Pacific pocket mouse): 125357200
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Entry
125357200 CDS
T08928
Symbol
Hdac2
Name
(RefSeq) histone deacetylase 2 isoform X1
KO
K06067
histone deacetylase 1/2 [EC:
3.5.1.98
]
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop03082
ATP-dependent chromatin remodeling
plop03083
Polycomb repressive complex
plop04110
Cell cycle
plop04213
Longevity regulating pathway - multiple species
plop04330
Notch signaling pathway
plop04350
TGF-beta signaling pathway
plop04613
Neutrophil extracellular trap formation
plop04919
Thyroid hormone signaling pathway
plop05016
Huntington disease
plop05031
Amphetamine addiction
plop05034
Alcoholism
plop05165
Human papillomavirus infection
plop05169
Epstein-Barr virus infection
plop05200
Pathways in cancer
plop05202
Transcriptional misregulation in cancer
plop05203
Viral carcinogenesis
plop05206
MicroRNAs in cancer
plop05220
Chronic myeloid leukemia
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
125357200 (Hdac2)
03083 Polycomb repressive complex
125357200 (Hdac2)
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
125357200 (Hdac2)
04350 TGF-beta signaling pathway
125357200 (Hdac2)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
125357200 (Hdac2)
09150 Organismal Systems
09151 Immune system
04613 Neutrophil extracellular trap formation
125357200 (Hdac2)
09152 Endocrine system
04919 Thyroid hormone signaling pathway
125357200 (Hdac2)
09149 Aging
04213 Longevity regulating pathway - multiple species
125357200 (Hdac2)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
125357200 (Hdac2)
05202 Transcriptional misregulation in cancer
125357200 (Hdac2)
05206 MicroRNAs in cancer
125357200 (Hdac2)
05203 Viral carcinogenesis
125357200 (Hdac2)
09162 Cancer: specific types
05220 Chronic myeloid leukemia
125357200 (Hdac2)
09172 Infectious disease: viral
05169 Epstein-Barr virus infection
125357200 (Hdac2)
05165 Human papillomavirus infection
125357200 (Hdac2)
09164 Neurodegenerative disease
05016 Huntington disease
125357200 (Hdac2)
09165 Substance dependence
05031 Amphetamine addiction
125357200 (Hdac2)
05034 Alcoholism
125357200 (Hdac2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
plop03036
]
125357200 (Hdac2)
Enzymes [BR:
plop01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
125357200 (Hdac2)
Chromosome and associated proteins [BR:
plop03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class I HDACs
125357200 (Hdac2)
HDAC complexes
Sin3A-HDAC complex
125357200 (Hdac2)
BRAF-HDAC complex
125357200 (Hdac2)
REST complex
125357200 (Hdac2)
SHIP complex
125357200 (Hdac2)
MiDAC complex
125357200 (Hdac2)
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
125357200 (Hdac2)
Heterochromatin formation proteins
Other heterochromatin formation proteins
125357200 (Hdac2)
Chromatin remodeling factors
NuRD complex
125357200 (Hdac2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
Motif
Other DBs
NCBI-GeneID:
125357200
NCBI-ProteinID:
XP_048209897
LinkDB
All DBs
Position
9:complement(36621863..36650977)
Genome browser
AA seq
458 aa
AA seq
DB search
MKPHRIRMTHNLLLNYGLYRKMEIYRPHKATAEEMTKYHSDEYIKFLRSIRPDNMSEYSK
QMQRFNVGEDCPVFDGLFEFCQLSTGGSVAGAVKLNRQQTDMAVNWAGGLHHAKKSEASG
FCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEAFYTTDRVMTVSFHKYGEYFPGTG
DLRDIGAGKGKYYAVNFPMRDGIDDESYGQIFKPIISKVMEMYQPSAVVLQCGADSLSGD
RLGCFNLTVKGHAKCVEVVKTFNLPLLMLGGGGYTIRNVARCWTYETAVALDCEIPNELP
YNDYFEYFGPDFKLHISPSNMTNQNTPEYMEKIKQRLFENLRMLPHAPGVQMQAIPEDAV
HEDSGDEDGEDPDKRISIRASDKRIACDEEFSDSEDEGEGGRRNVADHKKGAKKARIEED
KKETEDKKADVKEEDKSKEGSGEKTDTKGAKSEQLSNP
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgaaaccacacagaattcggatgactcataacttgctgttaaattatggtttatacaga
aaaatggaaatatataggccccataaagccactgctgaagaaatgacaaagtatcacagt
gatgagtatatcaaatttctacggtcaataagaccagacaacatgtctgagtatagtaaa
cagatgcagagatttaatgttggagaagattgtcctgtgtttgatgggctctttgagttt
tgtcaactctccactggtggttcagttgctggggctgtgaaattgaaccgacaacaaact
gatatggctgtcaactgggctggaggattacatcatgccaagaaatcggaagcatcagga
ttctgttatgtgaatgatattgtgcttgctatccttgagttacttaagtatcatcaaagg
gtcttatatattgacatagatatccatcatggtgatggtgttgaagaagctttttataca
acagatcgtgtgatgactgtttccttccacaaatatggtgaatactttcctggcacagga
gacttgagggatattggtgctggaaagggcaaatattatgctgtcaattttccaatgaga
gatggtatagacgatgagtcatatgggcagatatttaagcctatcatctcaaaagtgatg
gagatgtatcaacccagtgctgtggtattacaatgtggtgcagattcattatctggtgat
agacttggttgcttcaacctaacagtcaaaggtcatgctaagtgtgtagaagttgtaaaa
acttttaacttaccattgttgatgcttgggggaggtggatacacaatccgtaacgttgca
agatgttggacatatgagacagcggttgcccttgattgcgagattcccaatgagttgcca
tataatgattactttgaatattttggaccggacttcaaactgcatattagtccttcaaac
atgacaaaccagaacactccagaatatatggaaaagataaaacagcgtttatttgaaaat
ttacgcatgttacctcatgcacctggtgtccaaatgcaagctatcccagaagatgctgtt
catgaggacagtggcgatgaagatggagaagatcccgacaagaggatttcaattcgagca
tcagacaaacggatagcttgtgatgaagaattctcagattctgaggatgaaggagaagga
ggtcgtagaaatgtagctgatcataagaaaggagcaaagaaagctaggattgaagaagac
aagaaagaaacagaagacaagaaagcagatgttaaggaagaagataaatccaaggaaggt
agtggtgaaaagacagataccaaaggagccaaatcagaacaactcagcaacccttga
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