KEGG   Perognathus longimembris pacificus (Pacific pocket mouse): 125357200
Entry
125357200         CDS       T08928                                 
Symbol
Hdac2
Name
(RefSeq) histone deacetylase 2 isoform X1
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
plop  Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop03082  ATP-dependent chromatin remodeling
plop03083  Polycomb repressive complex
plop04110  Cell cycle
plop04213  Longevity regulating pathway - multiple species
plop04330  Notch signaling pathway
plop04350  TGF-beta signaling pathway
plop04613  Neutrophil extracellular trap formation
plop04919  Thyroid hormone signaling pathway
plop05016  Huntington disease
plop05031  Amphetamine addiction
plop05034  Alcoholism
plop05165  Human papillomavirus infection
plop05169  Epstein-Barr virus infection
plop05200  Pathways in cancer
plop05202  Transcriptional misregulation in cancer
plop05203  Viral carcinogenesis
plop05206  MicroRNAs in cancer
plop05220  Chronic myeloid leukemia
Brite
KEGG Orthology (KO) [BR:plop00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    125357200 (Hdac2)
   03083 Polycomb repressive complex
    125357200 (Hdac2)
 09130 Environmental Information Processing
  09132 Signal transduction
   04330 Notch signaling pathway
    125357200 (Hdac2)
   04350 TGF-beta signaling pathway
    125357200 (Hdac2)
 09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    125357200 (Hdac2)
 09150 Organismal Systems
  09151 Immune system
   04613 Neutrophil extracellular trap formation
    125357200 (Hdac2)
  09152 Endocrine system
   04919 Thyroid hormone signaling pathway
    125357200 (Hdac2)
  09149 Aging
   04213 Longevity regulating pathway - multiple species
    125357200 (Hdac2)
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    125357200 (Hdac2)
   05202 Transcriptional misregulation in cancer
    125357200 (Hdac2)
   05206 MicroRNAs in cancer
    125357200 (Hdac2)
   05203 Viral carcinogenesis
    125357200 (Hdac2)
  09162 Cancer: specific types
   05220 Chronic myeloid leukemia
    125357200 (Hdac2)
  09172 Infectious disease: viral
   05169 Epstein-Barr virus infection
    125357200 (Hdac2)
   05165 Human papillomavirus infection
    125357200 (Hdac2)
  09164 Neurodegenerative disease
   05016 Huntington disease
    125357200 (Hdac2)
  09165 Substance dependence
   05031 Amphetamine addiction
    125357200 (Hdac2)
   05034 Alcoholism
    125357200 (Hdac2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:plop03036]
    125357200 (Hdac2)
Enzymes [BR:plop01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     125357200 (Hdac2)
Chromosome and associated proteins [BR:plop03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     125357200 (Hdac2)
   HDAC complexes
    Sin3A-HDAC complex
     125357200 (Hdac2)
    BRAF-HDAC complex
     125357200 (Hdac2)
    REST complex
     125357200 (Hdac2)
    SHIP complex
     125357200 (Hdac2)
    MiDAC complex
     125357200 (Hdac2)
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     125357200 (Hdac2)
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    125357200 (Hdac2)
  Chromatin remodeling factors
   NuRD complex
    125357200 (Hdac2)
SSDB
Motif
Pfam: Hist_deacetyl
Other DBs
NCBI-GeneID: 125357200
NCBI-ProteinID: XP_048209897
LinkDB
Position
9:complement(36621863..36650977)
AA seq 458 aa
MKPHRIRMTHNLLLNYGLYRKMEIYRPHKATAEEMTKYHSDEYIKFLRSIRPDNMSEYSK
QMQRFNVGEDCPVFDGLFEFCQLSTGGSVAGAVKLNRQQTDMAVNWAGGLHHAKKSEASG
FCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEAFYTTDRVMTVSFHKYGEYFPGTG
DLRDIGAGKGKYYAVNFPMRDGIDDESYGQIFKPIISKVMEMYQPSAVVLQCGADSLSGD
RLGCFNLTVKGHAKCVEVVKTFNLPLLMLGGGGYTIRNVARCWTYETAVALDCEIPNELP
YNDYFEYFGPDFKLHISPSNMTNQNTPEYMEKIKQRLFENLRMLPHAPGVQMQAIPEDAV
HEDSGDEDGEDPDKRISIRASDKRIACDEEFSDSEDEGEGGRRNVADHKKGAKKARIEED
KKETEDKKADVKEEDKSKEGSGEKTDTKGAKSEQLSNP
NT seq 1377 nt   +upstreamnt  +downstreamnt
atgaaaccacacagaattcggatgactcataacttgctgttaaattatggtttatacaga
aaaatggaaatatataggccccataaagccactgctgaagaaatgacaaagtatcacagt
gatgagtatatcaaatttctacggtcaataagaccagacaacatgtctgagtatagtaaa
cagatgcagagatttaatgttggagaagattgtcctgtgtttgatgggctctttgagttt
tgtcaactctccactggtggttcagttgctggggctgtgaaattgaaccgacaacaaact
gatatggctgtcaactgggctggaggattacatcatgccaagaaatcggaagcatcagga
ttctgttatgtgaatgatattgtgcttgctatccttgagttacttaagtatcatcaaagg
gtcttatatattgacatagatatccatcatggtgatggtgttgaagaagctttttataca
acagatcgtgtgatgactgtttccttccacaaatatggtgaatactttcctggcacagga
gacttgagggatattggtgctggaaagggcaaatattatgctgtcaattttccaatgaga
gatggtatagacgatgagtcatatgggcagatatttaagcctatcatctcaaaagtgatg
gagatgtatcaacccagtgctgtggtattacaatgtggtgcagattcattatctggtgat
agacttggttgcttcaacctaacagtcaaaggtcatgctaagtgtgtagaagttgtaaaa
acttttaacttaccattgttgatgcttgggggaggtggatacacaatccgtaacgttgca
agatgttggacatatgagacagcggttgcccttgattgcgagattcccaatgagttgcca
tataatgattactttgaatattttggaccggacttcaaactgcatattagtccttcaaac
atgacaaaccagaacactccagaatatatggaaaagataaaacagcgtttatttgaaaat
ttacgcatgttacctcatgcacctggtgtccaaatgcaagctatcccagaagatgctgtt
catgaggacagtggcgatgaagatggagaagatcccgacaagaggatttcaattcgagca
tcagacaaacggatagcttgtgatgaagaattctcagattctgaggatgaaggagaagga
ggtcgtagaaatgtagctgatcataagaaaggagcaaagaaagctaggattgaagaagac
aagaaagaaacagaagacaagaaagcagatgttaaggaagaagataaatccaaggaaggt
agtggtgaaaagacagataccaaaggagccaaatcagaacaactcagcaacccttga

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