KEGG   Perognathus longimembris pacificus (Pacific pocket mouse): 125359173
Entry
125359173         CDS       T08928                                 
Symbol
Rxrg
Name
(RefSeq) retinoic acid receptor RXR-gamma isoform X1
  KO
K08526  retinoid X receptor gamma
Organism
plop  Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop03320  PPAR signaling pathway
plop04659  Th17 cell differentiation
plop04919  Thyroid hormone signaling pathway
plop04920  Adipocytokine signaling pathway
plop04928  Parathyroid hormone synthesis, secretion and action
plop05200  Pathways in cancer
plop05202  Transcriptional misregulation in cancer
plop05207  Chemical carcinogenesis - receptor activation
plop05216  Thyroid cancer
plop05222  Small cell lung cancer
plop05223  Non-small cell lung cancer
plop05226  Gastric cancer
plop05417  Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:plop00001]
 09150 Organismal Systems
  09151 Immune system
   04659 Th17 cell differentiation
    125359173 (Rxrg)
  09152 Endocrine system
   04920 Adipocytokine signaling pathway
    125359173 (Rxrg)
   03320 PPAR signaling pathway
    125359173 (Rxrg)
   04919 Thyroid hormone signaling pathway
    125359173 (Rxrg)
   04928 Parathyroid hormone synthesis, secretion and action
    125359173 (Rxrg)
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    125359173 (Rxrg)
   05202 Transcriptional misregulation in cancer
    125359173 (Rxrg)
   05207 Chemical carcinogenesis - receptor activation
    125359173 (Rxrg)
  09162 Cancer: specific types
   05226 Gastric cancer
    125359173 (Rxrg)
   05216 Thyroid cancer
    125359173 (Rxrg)
   05222 Small cell lung cancer
    125359173 (Rxrg)
   05223 Non-small cell lung cancer
    125359173 (Rxrg)
  09166 Cardiovascular disease
   05417 Lipid and atherosclerosis
    125359173 (Rxrg)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:plop03000]
    125359173 (Rxrg)
  09183 Protein families: signaling and cellular processes
   03310 Nuclear receptors [BR:plop03310]
    125359173 (Rxrg)
Transcription factors [BR:plop03000]
 Eukaryotic type
  Zinc finger
   Cys4 hepatocyte nuclear factor 4-like
    125359173 (Rxrg)
Nuclear receptors [BR:plop03310]
 2. Hepatocyte nuclear factor 4 like
  2B. Retinoid X receptor (RXR)
   125359173 (Rxrg)
SSDB
Motif
Pfam: Nuc_recep-AF1 Hormone_recep zf-C4
Other DBs
NCBI-GeneID: 125359173
NCBI-ProteinID: XP_048212710
LinkDB
Position
11:32809329..32852744
AA seq 463 aa
MYGNYPHFMKFPAGFGGTPGHTGSTSMSPSAALSTGKPMDGHPSYTDTPVSAPRTLSAVG
TPLNALGSPYRVITSAMGPPSGALAASPGINLVAPPSSQLNVVNSVSSSEDIKPLPGLPG
LGNMNYPSTSPGSLVKHICAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLIYTCRDNKD
CLIDKRQRNRCQYCRYQKCLVMGMKREAVQEERQRSRERAESEAECTSGGHEDMPVERIL
EAELAVEPKTESYGDMNMENSTNDPVTNICHAADKQLFTLVEWAKRIPHFSDLTLEDQVI
LLRAGWNELLIASFSHRSVSVQDGILLATGLHVHRSSAHSAGVGSIFDRVLTELVSKMKD
MQMDKSELGCLRAIVLFNPDAKGLSNPSEVETLREKVYATLEAYTKQKYPEQPGRFAKLL
LRLPALRSIGLKCLEHLFFFKLIGDTPIDTFLMEMLETPLQIT
NT seq 1392 nt   +upstreamnt  +downstreamnt
atgtatggaaattacccccacttcatgaagtttcctgcgggctttggcggcacaccgggc
cacactggttccacgtccatgagtccatcagcagccttgtccacaggaaagccaatggat
ggccaccccagctacacagacaccccagtaagtgccccacggactctgagtgcggtagga
actcccctcaatgccctgggctctccataccgagtcatcacttcagccatgggcccaccc
tcaggagcactggcagcctcaccaggaatcaatttggtcgccccacccagctctcagcta
aatgtggtcaacagcgtcagcagttctgaggacatcaagcccttacccgggcttcccggg
cttggaaacatgaattacccatctaccagccctggatctctggtgaaacacatctgcgcc
atctgtggagacagatcctcaggaaagcactacggggtgtacagctgtgagggctgcaaa
gggttcttcaagaggaccataaggaaagatctgatctacacttgtcgggataataaggat
tgtctcattgacaagcgccagcgcaaccgctgccagtactgtcgctatcagaagtgcctt
gtcatgggcatgaagagggaagcggtgcaagaagaaagacagaggagccgggagcgagct
gagagtgaagcagaatgtaccagtggtggccatgaagacatgcctgtggagaggattcta
gaagctgaacttgcagtggaaccaaagacagaatcctatggtgacatgaacatggagaac
tcaacaaacgaccctgttaccaacatatgccatgctgctgataagcaacttttcaccctt
gttgaatgggccaagcgcattcctcacttttctgacctcaccttggaggaccaggttatt
ctgctccgggcaggatggaatgaactgctgattgcctccttctcccaccgctcggtctcc
gtgcaggatggcatcctgctggccacgggtctccatgtccatcgaagcagtgctcacagt
gctggagtgggctctatctttgacagagttctaactgaactggtttccaaaatgaaagac
atgcagatggataagtcggagctgggctgcctgcgagccatcgtgctgtttaacccagat
gccaagggtctatccaacccttcggaagtggagacactgcgggagaaggtttatgccacc
ctggaggcctacaccaagcagaagtatccagaacaaccaggcaggttcgccaagctgctg
ctgcgcctcccagctctgcgctccattggtctgaaatgcctggagcacctcttcttcttc
aagctcattggggacacccccattgatactttcctcatggagatgctggagaccccgctg
cagatcacctga

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