Perognathus longimembris pacificus (Pacific pocket mouse): 125359173
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Entry
125359173 CDS
T08928
Symbol
Rxrg
Name
(RefSeq) retinoic acid receptor RXR-gamma isoform X1
KO
K08526
retinoid X receptor gamma
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop03320
PPAR signaling pathway
plop04659
Th17 cell differentiation
plop04919
Thyroid hormone signaling pathway
plop04920
Adipocytokine signaling pathway
plop04928
Parathyroid hormone synthesis, secretion and action
plop05200
Pathways in cancer
plop05202
Transcriptional misregulation in cancer
plop05207
Chemical carcinogenesis - receptor activation
plop05216
Thyroid cancer
plop05222
Small cell lung cancer
plop05223
Non-small cell lung cancer
plop05226
Gastric cancer
plop05417
Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09150 Organismal Systems
09151 Immune system
04659 Th17 cell differentiation
125359173 (Rxrg)
09152 Endocrine system
04920 Adipocytokine signaling pathway
125359173 (Rxrg)
03320 PPAR signaling pathway
125359173 (Rxrg)
04919 Thyroid hormone signaling pathway
125359173 (Rxrg)
04928 Parathyroid hormone synthesis, secretion and action
125359173 (Rxrg)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
125359173 (Rxrg)
05202 Transcriptional misregulation in cancer
125359173 (Rxrg)
05207 Chemical carcinogenesis - receptor activation
125359173 (Rxrg)
09162 Cancer: specific types
05226 Gastric cancer
125359173 (Rxrg)
05216 Thyroid cancer
125359173 (Rxrg)
05222 Small cell lung cancer
125359173 (Rxrg)
05223 Non-small cell lung cancer
125359173 (Rxrg)
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
125359173 (Rxrg)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
plop03000
]
125359173 (Rxrg)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
plop03310
]
125359173 (Rxrg)
Transcription factors [BR:
plop03000
]
Eukaryotic type
Zinc finger
Cys4 hepatocyte nuclear factor 4-like
125359173 (Rxrg)
Nuclear receptors [BR:
plop03310
]
2. Hepatocyte nuclear factor 4 like
2B. Retinoid X receptor (RXR)
125359173 (Rxrg)
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Gene cluster
GFIT
Motif
Pfam:
Nuc_recep-AF1
Hormone_recep
zf-C4
Motif
Other DBs
NCBI-GeneID:
125359173
NCBI-ProteinID:
XP_048212710
LinkDB
All DBs
Position
11:32809329..32852744
Genome browser
AA seq
463 aa
AA seq
DB search
MYGNYPHFMKFPAGFGGTPGHTGSTSMSPSAALSTGKPMDGHPSYTDTPVSAPRTLSAVG
TPLNALGSPYRVITSAMGPPSGALAASPGINLVAPPSSQLNVVNSVSSSEDIKPLPGLPG
LGNMNYPSTSPGSLVKHICAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLIYTCRDNKD
CLIDKRQRNRCQYCRYQKCLVMGMKREAVQEERQRSRERAESEAECTSGGHEDMPVERIL
EAELAVEPKTESYGDMNMENSTNDPVTNICHAADKQLFTLVEWAKRIPHFSDLTLEDQVI
LLRAGWNELLIASFSHRSVSVQDGILLATGLHVHRSSAHSAGVGSIFDRVLTELVSKMKD
MQMDKSELGCLRAIVLFNPDAKGLSNPSEVETLREKVYATLEAYTKQKYPEQPGRFAKLL
LRLPALRSIGLKCLEHLFFFKLIGDTPIDTFLMEMLETPLQIT
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgtatggaaattacccccacttcatgaagtttcctgcgggctttggcggcacaccgggc
cacactggttccacgtccatgagtccatcagcagccttgtccacaggaaagccaatggat
ggccaccccagctacacagacaccccagtaagtgccccacggactctgagtgcggtagga
actcccctcaatgccctgggctctccataccgagtcatcacttcagccatgggcccaccc
tcaggagcactggcagcctcaccaggaatcaatttggtcgccccacccagctctcagcta
aatgtggtcaacagcgtcagcagttctgaggacatcaagcccttacccgggcttcccggg
cttggaaacatgaattacccatctaccagccctggatctctggtgaaacacatctgcgcc
atctgtggagacagatcctcaggaaagcactacggggtgtacagctgtgagggctgcaaa
gggttcttcaagaggaccataaggaaagatctgatctacacttgtcgggataataaggat
tgtctcattgacaagcgccagcgcaaccgctgccagtactgtcgctatcagaagtgcctt
gtcatgggcatgaagagggaagcggtgcaagaagaaagacagaggagccgggagcgagct
gagagtgaagcagaatgtaccagtggtggccatgaagacatgcctgtggagaggattcta
gaagctgaacttgcagtggaaccaaagacagaatcctatggtgacatgaacatggagaac
tcaacaaacgaccctgttaccaacatatgccatgctgctgataagcaacttttcaccctt
gttgaatgggccaagcgcattcctcacttttctgacctcaccttggaggaccaggttatt
ctgctccgggcaggatggaatgaactgctgattgcctccttctcccaccgctcggtctcc
gtgcaggatggcatcctgctggccacgggtctccatgtccatcgaagcagtgctcacagt
gctggagtgggctctatctttgacagagttctaactgaactggtttccaaaatgaaagac
atgcagatggataagtcggagctgggctgcctgcgagccatcgtgctgtttaacccagat
gccaagggtctatccaacccttcggaagtggagacactgcgggagaaggtttatgccacc
ctggaggcctacaccaagcagaagtatccagaacaaccaggcaggttcgccaagctgctg
ctgcgcctcccagctctgcgctccattggtctgaaatgcctggagcacctcttcttcttc
aagctcattggggacacccccattgatactttcctcatggagatgctggagaccccgctg
cagatcacctga
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