Perognathus longimembris pacificus (Pacific pocket mouse): 125364240
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Entry
125364240 CDS
T08928
Symbol
Rarg
Name
(RefSeq) retinoic acid receptor gamma isoform X1
KO
K08529
retinoic acid receptor gamma
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
plop03000
]
125364240 (Rarg)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
plop03310
]
125364240 (Rarg)
Transcription factors [BR:
plop03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
125364240 (Rarg)
Nuclear receptors [BR:
plop03310
]
1. Thyroid hormone like
1B. Retinoic acid receptor (RAR)
125364240 (Rarg)
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GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Oest_recep
Motif
Other DBs
NCBI-GeneID:
125364240
NCBI-ProteinID:
XP_048219686
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Position
1:49703954..49728340
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AA seq
485 aa
AA seq
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MLALPLPPPGAGRRGGRRGNGLRVLGVLAPSFPPSRVAMYDCMESFAPGPRRLYGAAGPG
AGLLRRATGSSCFAGLETFAWPQPASLQSVETQSTSSEEMVPSSPSPPPPPRVYKPCFVC
NDKSSGYHYGVSSCEGCKGFFRRSIQKNMVYTCHRDKNCIINKVTRNRCQYCRLQKCFEV
GMSKEAVRNDRNKKKKEVKEEGSPDSYELSPQLEELITKVSKAHQETFPSLCQLGKYTTN
SSADHRVQLDLGLWDKFSELATKCIIKIVEFAKRLPGFTGLSIADQITLLKAACLDILML
RICTRYTPEQDTMTFSDGLTLNRTQMHNAGFGPLTDLVFAFAGQLLPLEMDDTETGLLSA
ICLICGDRMDLEEPEKVDKLQEPLLEALRLYARRRRPNQPYMFPRMLMKITDLRGISTKG
AERAITLKMEIPGPMPPLIREMLENPEMFEDDSSQPGSNPKASSEDEAPGNQGKGDQSPQ
PDQGP
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atgctagccctccccctcccccctccaggagcggggcgccgcggggggaggagggggaat
gggctgcgggtccttggtgttctagcacccagctttcctccaagccgggtcgcgatgtac
gactgcatggaatcgtttgccccgggtccgcgacggctgtatggggccgccgggcccggg
gccggcttgctgcgcagagccactggcagctcctgtttcgccggacttgagacttttgcc
tggccacaacccgccagtctgcaatcggtggagacacaaagcactagctcagaggaaatg
gtgcccagctcgccctcacccccaccacctcctcgggtctacaagccgtgcttcgtgtgt
aacgacaagtcctctggctaccactatggggtcagctcgtgtgaaggctgcaagggcttc
ttccgacgaagcatccagaagaacatggtatacacatgtcaccgtgacaaaaactgcatc
atcaacaaggtcaccaggaatcgctgtcaatactgccggctgcaaaagtgctttgaagta
ggcatgtccaaggaagctgtgcggaatgaccggaacaagaagaagaaagaggtgaaggaa
gaagggtcacccgacagctatgagctgagcccccagttagaagagctcatcaccaaggtc
agcaaggcccatcaggagacattcccctcgctctgccagctgggcaagtacaccacgaac
tccagtgcagaccaccgagtgcagctggacctggggctgtgggacaagttcagtgaactg
gccaccaagtgcatcatcaagatcgtggagttcgccaagcggttacctggcttcacaggg
ctcagcatcgctgatcagatcaccctgctcaaggctgcctgcctggacatcctgatgctt
cggatctgcacaaggtacactccagaacaggacaccatgaccttctccgacgggctgacc
ctgaacaggacccagatgcacaatgctggctttgggcccctcacagatctcgtctttgct
tttgcggggcagctcctgccactggagatggatgacaccgagactgggctactcagtgcc
atctgcctcatctgtggagaccgcatggacctggaagaacctgaaaaagtggacaagctg
caggagccactgctggaagccctgaggctatatgcccggcgccggcggcccaaccaaccc
tacatgttcccaaggatgcttatgaaaatcactgaccttcggggcatcagcaccaaggga
gcagaaagggccattaccctgaagatggagattccaggccccatgccccccctgatccga
gagatgctggagaatcctgaaatgtttgaggacgactcctcgcagcctggttccaatccc
aaggcctccagcgaggatgaagctcctggaaaccagggcaaaggggaccaaagtccccag
cctgaccagggcccctga
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