Perognathus longimembris pacificus (Pacific pocket mouse): 125365694
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Entry
125365694 CDS
T08928
Symbol
Tsen54
Name
(RefSeq) tRNA-splicing endonuclease subunit Sen54
KO
K15326
tRNA-splicing endonuclease subunit Sen54
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
plop03016
]
125365694 (Tsen54)
Transfer RNA biogenesis [BR:
plop03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing endonuclease complex
125365694 (Tsen54)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
tRNA_int_end_N2
tRNA_int_endo_N
Motif
Other DBs
NCBI-GeneID:
125365694
NCBI-ProteinID:
XP_048221883
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Position
17:52283388..52291548
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AA seq
526 aa
AA seq
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MEPEPEPRTVEVPAGRVLRAAELLAARSRSQKLPQRSHGPKDFLPDGSEAQAERLRRCRQ
ELWQLLAEERVERLGSLVAAEWRPKEGFVELTSPAGKFWQTMGFSEQGRQRLHPEEALYL
LECGSIQLFHQDLPLSIQEAYQLLLTEDPLSFLQYQVFSHLKRLGYVVRRFQPSSVLSPY
ERQLNLDGYTQCLKDGTSKRKKSEESSWFMNKKAKALENSVPAVSLAAASPPACNQKSQS
LEEKPQEPISRKSPGSPFQSPGPPEPCLALAMEGMGCGQQRDKIKNGVKGACKPRWNFEQ
ISFPNLASDSRHTLLSAPASELLPANVTGRETDAESWCQKLNQRKEKLSRREQEQQAEAH
RFREDLNADPEVQRCSRWREYKELLQRRQLQKSQHCPPHLWGQPVTPLLSPSQAHSPATV
LQHISVLQTTHLADGGAQLLEKSGGLEISFDVYQADAVATFRKNNPGKPYVRMCVSGFDQ
PVPDLCSLKRLSYQSGDVPLIFALVDHGDISFYSFRDFTLPKDLEH
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
atggagcccgaaccggagccccggacggtggaggttcccgcggggcgcgtgctgagggcc
gcggagctcctcgccgcccgctcgcggtcccagaagctgccccagcggtcccatggcccg
aaggacttcctccccgacggctccgaggcgcaggccgagcggctgcgccgctgccgccag
gaactctggcagctgctggcggaggagcgggtggagcgcctgggcagcttggtggccgcc
gagtggagacccaaagagggcttcgtggagttgacgtctccggcgggtaagttctggcag
accatgggcttctcagagcagggccggcagcgactgcatcccgaagaggccttatacctg
ctggagtgtggctccattcagctcttccatcaagacctgccgctgtctatccaggaggcc
taccagttactgctgaccgaggaccccttgagtttcctgcagtaccaggtcttcagccac
ctgaaaagactgggctatgtagttcgacgattccagccaagctccgtcctgtctccttac
gagaggcagcttaacttagatggctacacccagtgcctgaaggatgggaccagcaagagg
aagaagagcgaggagagctcttggttcatgaataagaaagccaaagccctggagaactct
gtgccagctgtgagcctggcagccgccagtccacctgcctgtaaccagaagagccaaagc
ctggaggagaaaccccaggagccaatctccagaaagagcccggggagcccctttcagtct
cccgggcccccggagccctgccttgctctggccatggagggcatggggtgcggccagcag
agggacaaaataaaaaatggagtcaagggagcttgcaagccacgctggaactttgagcag
atttccttccccaacctggcttccgacagccgtcacaccctcctgtctgccccagcctca
gagctgctgccggccaacgtcaccgggcgggagacggatgccgagtcctggtgtcagaag
ctgaaccagcggaaggagaagctctcccgacgcgagcaggaacagcaagcagaggcccac
cgattccgggaggacctgaacgcagatccagaggtgcagcgctgctcccgctggcgggag
tacaaggagctgctgcagagacggcaactgcaaaagagccagcactgccccccacacctg
tggggccagcccgtcacccccttgctgagccccagccaggcacactctccagccacagtc
cttcagcatatctctgtgctacagacaacacaccttgctgatgggggtgcccaactgctg
gagaagtctggaggcttggagatcagctttgatgtctatcaggccgatgcggtggctacg
ttccgaaagaataaccctggcaaaccctatgtccggatgtgtgttagtggatttgatcag
cctgtcccagacctctgcagcctcaagcggttgtcctaccagagtggggatgtccctctg
atcttcgccctggtggatcatggtgacatctccttttacagcttcagggacttcacactg
cccaaggatctggagcactga
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