Paenibacillus lautus: D5F53_28165
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Entry
D5F53_28165 CDS
T05701
Name
(GenBank) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
plw
Paenibacillus lautus
Pathway
plw00040
Pentose and glucuronate interconversions
plw01100
Metabolic pathways
plw02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
plw00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
D5F53_28165
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
D5F53_28165
Enzymes [BR:
plw01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
D5F53_28165
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Gene cluster
GFIT
Motif
Pfam:
CBM77
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-ProteinID:
AYB46946
UniProt:
A0A385TTA7
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Position
complement(6275614..6277671)
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AA seq
685 aa
AA seq
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MKNSVAKVTGMVLLFSLALALIAGGWVNKTMVHAAGLSIIGGGGWNETAYIEWSPVSNAE
GYNVYVKHANAPDSSYQPMDNELIRQYPSYWRADAVGLAAGNYVMKVEARLSDGSTVSAV
SNNLSVALHDRSGFAFSSDSPYGTGSGAYNDDGTLKDGAQVIYVTSETARTVTLDVKINS
SGGVQTGVGIGEILTLRQKGYDTTPLAIRFIGKVTDDDMSGQLNSSGYLQVKGKNNYSEM
NMTIEGIGDDAYAYGWGLLLRYVGNVEVRNLGLMLFPDDGISMDTGNVNVWVHNNDLFYG
TAGGDADQAKGDGSTDLKKGSTYITISYNHYWDSGKAALVGLSESEEFFVTFHHNWFDHS
DSRHPRIRLASVHIYNNFYDGVSKYGVGVTTGASAFVESNYFRHAKYPMLSSLQGTDALG
EGTFSGEDGGVIKAYNNRIVDADSLIYANSNTGTAPANAASFDAYLASSRIETVPSSYKA
FVGGTAYNNFDTTVDTGVNSADIDNVSDVEQIVTSQAGRLNNGDFTWEFNDAVDDTSYAL
NTALMAKISSYTSGLVSVGGNSTGAEPEPEPEPSTGEQVHNFTTSGLASDFFNIVGNLST
TKGTAAYNGLTLTQCLKIESSTRITFTSTETATLTLVFNSADGTKIKIDGTSYPMTNGMV
SVPLAPGAHTITKDHTTNLFYMELE
NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
atgaagaacagcgtggcaaaggtaaccggcatggtgttgttgttttctctggcgctagct
ctcatagcgggaggatgggtgaataagacaatggtccatgctgccggtctttcgattatc
ggcggcgggggctggaatgaaacggcgtatatagaatggtcacccgtgagtaatgcggag
ggatacaatgtttacgtgaaacacgcgaatgcgccggattccagctatcaaccaatggat
aatgagctgatccggcaatacccttcctattggagagcagatgctgttggactcgcagca
ggaaattatgtcatgaaggttgaagccaggctgagtgacggttcaacggtaagtgccgtt
tcgaataacctatccgtagcgctgcatgatcgatccggatttgctttttcctcagactcg
ccatacgggactggctcgggtgcctacaatgatgacggtacgcttaaagatggtgcacaa
gttatttatgtgacctccgagacggcacgaaccgtaacccttgatgtgaaaatcaacagc
tcaggcggggttcaaacgggcgtggggatcggcgagattttgacgctaagacaaaaaggc
tatgatacaacccctcttgcgatccggtttattggaaaagttaccgatgacgacatgagc
ggacagctgaatagcagcggctaccttcaagtaaaaggcaaaaacaattactcggaaatg
aatatgacgatcgaagggatcggagacgacgcttatgcttatgggtggggattgctcctt
agatacgtagggaatgtggaagtaagaaacctcgggctcatgttgtttcctgatgatgga
atttccatggatacaggaaacgtcaacgtgtgggtgcataataacgatctattttatgga
accgcaggaggagatgccgaccaggccaagggcgatggttcaacggatctgaaaaaagga
tcgacctatattacaatctcctacaatcactactgggattcgggaaaagcggctttggtc
ggtttgagtgaatcggaggaattctttgtcaccttccaccataactggtttgatcactcg
gactcccgccatccgcgaatccgattggcatcggttcacatctataataatttctatgac
ggagtctcaaaatatggggtcggtgtgacaacgggagcttcagccttcgtggaatccaat
tactttagacatgccaaatacccgatgttgagctccttgcaaggtaccgatgctttaggg
gaagggaccttttcgggcgaggacggaggcgtgattaaggcttataacaataggatcgta
gatgcggacagcctgatttatgcaaattccaataccggaacagctccggcaaatgcagcc
tcattcgatgcatacttggcttcgtcaagaattgaaaccgtaccaagctcatacaaagca
ttcgtgggaggaacggcttataataacttcgatacaaccgtcgatacgggagtgaatagc
gccgacatcgataacgtgagcgatgtagaacagattgtcacctcacaagccggacgcctg
aataacggggatttcacctgggaattcaatgatgccgttgacgacacatcctatgccctc
aatacagctctaatggctaaaataagcagctacaccagtgggcttgtatccgtaggcggg
aattcaaccggggcggagccggaaccagaaccagagccgtccaccggagaacaagttcac
aactttacaacatccggattggcaagcgatttcttcaatattgtagggaatctctccaca
accaagggaactgcggcgtataacggcttaacgctaacccaatgtttgaaaatcgagagt
tcaacccgcattacctttacctctacggaaaccgctacattaacattagtgtttaattcg
gcagacggaaccaagatcaagattgatggaacgagttatcccatgacgaatggtatggtc
agtgtgccacttgctccaggagcgcatacgattacaaaagatcatacgacgaatctcttt
tatatggagttggagtag
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