Planococcus sp. MB-3u-03: CW734_09010
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Entry
CW734_09010 CDS
T05387
Name
(GenBank) deoxyribonuclease IV
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
plx
Planococcus sp. MB-3u-03
Pathway
plx03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
plx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CW734_09010
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
plx03400
]
CW734_09010
Enzymes [BR:
plx01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
CW734_09010
DNA repair and recombination proteins [BR:
plx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
CW734_09010
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
OST3_OST6
Motif
Other DBs
NCBI-ProteinID:
AUD13758
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All DBs
Position
1548695..1549573
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AA seq
292 aa
AA seq
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MSGKKMLLGASEEAASYGSTTFMIYTGAPQNTRRKPIEELNIEAGRAHMAENGLSNIIVH
APYIINIANTTKPATFELGVEFLQSEIERTAALGAEQIVLHPGAHVGAGVEAGTQKIIDG
LNEVLTQDFPVNIALETMAGKGSEIGRNFEELAAIINGVTHNERLSVCFDTCHVHDAGYD
IKEDFDGVLAEFDRIIGIDRLQVLHINDSKNVRGAGKDRHENIGFGEIGFDALNSIVHHK
QLMHVPKILETPYVGLDAKKKKAPYAYEIDMFKNGIFAPDDIEKMKLPIESQ
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
atgagcggcaagaagatgcttctcggcgcgagcgaggaagccgcttcctacggctccacg
actttcatgatctatacgggcgcaccgcaaaatacgcgccgcaaaccgatcgaagaacta
aatatcgaggcgggacgggcgcatatggcggagaacggcctgtcgaatatcatcgttcac
gcaccttatatcataaatatcgccaacacgaccaaacctgcaacgttcgaactcggcgtt
gagttcctgcagtcggaaatcgaacgtacggcagcacttggggcggaacaaatcgtcttg
catcccggtgcgcatgtcggcgcgggagtggaagccggcacacagaaaatcatcgacggc
ttgaacgaagtgctgacgcaggattttccggtcaatatcgcccttgagacgatggctgga
aaaggcagtgaaattggccgcaatttcgaggagttggcagcgattatcaacggcgtgacg
cataacgagcgcttgtcggtatgtttcgatacatgccatgtccacgatgccggttatgac
atcaaagaagatttcgacggtgtgctggcggaattcgaccgcatcatcggaatcgaccga
ttgcaagtactgcacatcaacgacagcaagaacgtgcgcggggcagggaaagaccgccac
gaaaacatcggcttcggcgagatcggttttgatgcactcaattcgattgtccaccataaa
caattgatgcatgtcccgaaaatactcgagacgccgtatgtcggactggatgcgaaaaag
aaaaaagcgccatatgcatacgaaatcgacatgttcaaaaacggcatctttgcgcctgat
gacatcgaaaagatgaaattgccgatcgaatcacaataa
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