Candidatus Portiera aleyrodidarum BT-B-HRs: C530_064
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Entry
C530_064 CDS
T02267
Name
(GenBank) DNA-directed RNA polymerase beta' subunit
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
ply
Candidatus Portiera aleyrodidarum BT-B-HRs
Pathway
ply03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ply00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
C530_064
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ply03021
]
C530_064
03400 DNA repair and recombination proteins [BR:
ply03400
]
C530_064
Enzymes [BR:
ply01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
C530_064
Transcription machinery [BR:
ply03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
C530_064
DNA repair and recombination proteins [BR:
ply03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
C530_064
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Apocytochr_F_C
Motif
Other DBs
NCBI-ProteinID:
AFT80710
LinkDB
All DBs
Position
83579..87697
Genome browser
AA seq
1372 aa
AA seq
DB search
MKELVKKIKSKTYYEEFDAIKISLASPERIRSWSYGEVKKPETINYRTLKPERDGLFCAK
IFGPIKDYECICGKYKRMKHRGIICEKCGVEVTKTCVRRERMSHIELASPVAHIWFLKSL
PSRIGILLDMTLRDIERILYFEVFVVIEPGMTNLKKGQLLNEEKYFEALEEYGDEFNARM
GAEAIKFLLEDIELVEQLEKIRSEIKQVHSENKIKKLTKRLKLIEALKISGNKPSWMILE
VLPILPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLIELKAPEIIVRNEKRMLQ
EAVDALLDNGRRGRAIIGSNKRPLKSLADMIKGKQGRFRQNLLGKRVDYSGRSVITVCPK
LRLNQCGLPKKMAIELFKPFIYSKLQRNGYAATIKAAKLLVEKEVPEVWDILADVICEHP
VLLNRAPTLHRLGIQAFEPILIEGKAIQLHPLVCAAYNADFDGDQMAVHIPLTLESQLEA
RELMMSTNNLLSPANGEPIIVPSQDVVLGLYYMTRETCNGIGEGLIFSNINEVEIAYSNK
KVDLHSRIKVRLTDWIKDDKQKVSTQTSIRHTTVGRALLYGMLPNGMSFELINRPMKKKV
ISNLINLVYRNIGLKKAVNLADKLMYTGFKLATLSGASIGVNDFVIPTEKEHIINKAEKE
VKEIGKQYIYGLVTLGEKYNKVIEIWSKANDKVAKAMMNGISKSVVIDKSGKKVEQYSFN
SVFIMADSGSRGSAAQIRQLAGMRGLMTKPDGSIIETPITANFREGLNVLQYFISTHGAR
KGLADTALKTANSGYLTRRLVDVAQDVVITEIDCNTQEGLLMYSIIEGGDIIISITEKIL
GRILAKNILDLKGRILIKAGTLLDELWCKKIYRLGIDEVVVRSIIRCATQYGVCVMCYGR
DLSRGKLVNIGESVGVIAAQSIGEPGTQLTMRTFHIGGAASRTLIKDNVQVKYGGIIRFH
NMKAVERIDKKLIVVSRYCAIYIIDKKGREKEYYRLPYGAELNIREGCFVDAGTTVANWD
PHTHPIISEISGYIKFIDIEEGLTMHSTVDEMTGISSIEILDLGIRPLLGRNKRPRIMLQ
DETGKDISLPGYNTPVQYILPGNALITVENGRKIGVGETISRIPVEALGNKDITGGLPRV
AELVEARKPKEYAILAEITGQILFGKETKGKRRIIINSEETGKKKEILINKGRQICVFEG
DKVEKGEVISDGPSNPHDILRLLGVEELSKYIINEIQEVYRLQGVGINDKHIEVIIRQML
RKVIIKDSGDSEFIKGDQVEVGSVLETNRKLYKLKKKIISFERILLGITKSSLSTPSFIS
AASFQETTRVLTEAAVKGSYDKLRGLKENVVVGRLIPAGTGLAYHNDRRRKI
NT seq
4119 nt
NT seq
+upstream
nt +downstream
nt
atgaaggagttggtaaagaaaataaaatcaaaaacatattatgaagagtttgatgcaata
aaaatttcattagcatctccagaaaggatacgatcatggtcatatggtgaggtgaaaaaa
ccagaaacaattaattatcgtacattaaaacctgagagagatggattgttttgcgcaaaa
atatttggtcctattaaagattatgaatgtatttgtggtaaatataaacgaatgaaacat
agaggaataatatgtgaaaaatgtggcgttgaggttactaaaacatgtgtacgcagagaa
agaatgagtcatattgaattagcatctcctgttgcccatatatggtttttaaaatcatta
ccaagtaggattggcattttattagatatgacgttaagagatatagaaagaattttatat
tttgaagtctttgtagtaatagaaccaggtatgacaaatttaaagaaaggtcaattatta
aatgaagaaaaatattttgaagcattagaagaatatggtgatgaatttaatgcaagaatg
ggtgcagaagctataaagtttttgttagaagacatagagttagtagaacaactagagaaa
atcagaagcgaaattaaacaagtacattcagaaaataaaataaaaaaattgactaaacgg
ttaaaattaatagaagcattaaaaatatcaggaaataaaccaagttggatgattttagag
gttttacctatattacctccagatttaagacctttagtaccattggatggaggtaggttt
gcaacgtcagatttaaatgatttatataggcgtgttatcaatagaaataatagattaaaa
agattaattgaattaaaagctccagaaatcattgttcgcaatgaaaaaagaatgttacaa
gaagcagtagatgcattgttagataacggaagaagaggaagagcaattataggttcaaac
aaaagaccgttaaaatcattagcagatatgataaaaggaaaacagggaagatttcgtcaa
aacttattaggtaaacgtgtagattattcaggaaggtcggtaattacagtttgtccaaaa
ttaagattaaatcaatgtggtttacctaaaaaaatggctatagaattatttaaaccgttt
atatattcaaaattacaacgaaatggatacgcagcaactataaaagcagcaaaacttttg
gttgaaaaagaagtgccagaggtctgggacatattagctgatgtaatttgtgaacatcca
gttttgttgaatagagcccccactttacatagattgggtattcaagcgtttgaaccaatc
ttgatagaaggtaaagcaatacaattacatccattggtctgtgcagcttataatgcagat
tttgacggggatcaaatggcagtgcatatacctttaacattggaatcacaattagaagct
agagaattaatgatgtcaacaaataatttattatctccagcaaatggagaacctataatt
gtgccttcacaggatgtagttttaggtctatattatatgacaagggagacttgtaatgga
ataggtgaagggctgatcttttctaacataaacgaagtagaaatagcttatagcaataaa
aaagtggacttacattctcgtataaaggtccgtttgacagattggataaaagatgataaa
caaaaagtaagtacacagacatcaatacgacatacgactgtaggtcgtgctcttttatat
ggtatgttgccaaatggaatgagttttgaattaataaatagaccaatgaaaaaaaaagta
atatctaatttgattaatttagtttatagaaatattggattaaaaaaagctgtgaactta
gcagataaacttatgtatacaggttttaaactagctactttgtcaggtgcatcaattggc
gttaatgattttgttataccgactgaaaaagaacacataataaacaaagctgaaaaagaa
gtaaaagaaataggtaaacaatatatttatgggcttgtaactttaggagaaaaatataat
aaagttatagaaatttggtccaaagctaatgataaagttgcaaaagctatgatgaatggt
atatctaaatcagttgtgatagataaatctggaaaaaaagttgaacaatattcttttaat
agtgtttttattatggctgattcaggatccagaggaagtgcagctcaaattagacaatta
gcaggaatgcgtggcttgatgacaaaaccagatgggtctattattgaaacgcctataaca
gcaaactttcgtgaaggattaaatgttctacaatattttatatcaactcatggtgccaga
aaaggcttagcagatacagcattaaaaacagctaattcaggatatttaactagaagatta
gtagacgtagcacaagatgtcgtgatcacagaaatagactgtaatacacaagagggttta
ttaatgtattcaattatagaaggaggggatattattatctcaatcactgaaaaaatttta
ggtagaattttagcaaaaaatattttagatttaaaggggagaattttaattaaagcaggc
acactgttagatgaactatggtgtaaaaaaatttatagattaggaatagacgaggttgtt
gtacgtagtattattagatgtgcaacacaatatggtgtttgcgttatgtgttatggtagg
gatttatcaagagggaagttagtaaatattggtgaatcagtaggggtaatagctgcgcaa
tcaataggcgagccaggtactcaattaactatgcgtacatttcatataggtggagcagca
tcacgaacgttaataaaagataatgttcaagtaaaatatggtggtataataagatttcat
aatatgaaagcagtagaacgaattgataaaaagttaatagttgtgtctcgttattgtgct
atatatataatagacaaaaagggtagagaaaaagaatactatagactaccatatggtgca
gaactaaatattagagaaggatgttttgttgacgcaggtacaacagtagcaaattgggac
cctcatacacatccaattatttcagaaatatcaggttatataaagtttatcgatattgag
gaaggtttgacgatgcatagtactgtggatgaaatgaccggtatctcttcgatagaaata
ttagatttaggtattagacccctactaggaagaaataaaagaccaagaattatgttacaa
gatgaaaccggaaaagatatatcattgcctggttataacacgcctgtacaatatatttta
cctggtaatgctttgattacagtagaaaatggtagaaaaataggcgtaggggaaacaatt
tcaagaatacccgtagaagcattaggaaacaaagacataactggagggttaccccgtgtt
gcagaattggtagaggcaagaaagcctaaagaatatgcaatattggcagaaataacaggt
caaattttatttggtaaggaaacaaaaggtaaacggcgaataataataaattcagaagaa
acaggtaaaaaaaaagaaatattaattaataaaggccgtcaaatatgcgtttttgaaggg
gataaagtagagaaaggagaagtaatttctgatggcccaagtaatccacatgatatatta
cggttgttgggtgtagaggagttatcaaagtatattataaatgagatacaagaagtttat
agattacagggtgttggaataaacgataaacatattgaagttataataaggcaaatgtta
cgtaaggtaataataaaagattcaggagatagtgaatttataaaaggtgatcaagttgaa
gtaggatcagtattagaaacaaatagaaagttatataaattgaaaaaaaaaataattagt
tttgaaagaatattattaggtattactaagtcatcgttatcaacaccatcatttatttca
gcagcatcatttcaagaaacaacacgtgttttaacagaagcagcagttaaaggcagctat
gataagttaagaggtttaaaagaaaatgtcgttgtggggagattaattcctgcaggtact
ggtttagcataccacaatgaccgtcggagaaaaatttag
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integrated database retrieval system
