Paenibacillus lycopersici: GXP70_01650
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Entry
GXP70_01650 CDS
T07013
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K03088
RNA polymerase sigma-70 factor, ECF subfamily
Organism
plyc
Paenibacillus lycopersici
Brite
KEGG Orthology (KO) [BR:
plyc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
plyc03021
]
GXP70_01650
Transcription machinery [BR:
plyc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
GXP70_01650
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r4_2
Sigma70_ECF
DUF134
HTH_WhiA
HTH_16
Motif
Other DBs
NCBI-ProteinID:
QHT58810
UniProt:
A0A6C0FX81
LinkDB
All DBs
Position
361153..361689
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AA seq
178 aa
AA seq
DB search
MVAIIDRVMRARRGDETAFLAMFQHYEADLYRTAYAYAGNPEDALDIVQETAYRSFKAIG
GLKEPNYFKTWLIKIAMSCAVDLLRKRKQEAVLRPEYAEAMAVAGEDEDLPLSLSLQAWI
EALNADEKHVILLRFYYDYTIREVAEMMDIPLGTCKSLLYRALRKLRKRAEDEEDAYA
NT seq
537 nt
NT seq
+upstream
nt +downstream
nt
gtggttgcaatcattgatcgggtcatgcgggcccggcggggcgacgaaacggcgttcttg
gcgatgtttcaacactatgaggcggatttgtaccgcacggcgtacgcgtatgcgggcaat
ccggaggacgcgctcgatatcgtgcaggagacggcctatcgctccttcaaagcaatcgga
ggcttgaaggagccgaactatttcaagacatggctcatcaaaatcgccatgagctgcgcc
gtcgacctgctccgcaagcgcaagcaggaggcggtcttgaggccggagtacgccgaggcg
atggccgttgccggcgaggacgaggatctgccgctctcgctttcgctgcaggcttggatc
gaggcgctcaatgcggacgagaagcatgtgattctgttacgcttctattacgattacacg
atccgcgaagtagcggaaatgatggacatcccgctcggcacgtgcaagtcgctgctctac
cgggcgttaagaaagctgcgcaagcgggcggaggacgaggaggatgcatatgcctga
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