Pseudoalteromonas luteoviolacea: S4054249_14900
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Entry
S4054249_14900 CDS
T04577
Name
(GenBank) AAA family ATPase
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
plz
Pseudoalteromonas luteoviolacea
Pathway
plz03030
DNA replication
plz03430
Mismatch repair
plz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
plz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
S4054249_14900
03430 Mismatch repair
S4054249_14900
03440 Homologous recombination
S4054249_14900
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
plz03032
]
S4054249_14900
03400 DNA repair and recombination proteins [BR:
plz03400
]
S4054249_14900
Enzymes [BR:
plz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
S4054249_14900
DNA replication proteins [BR:
plz03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
S4054249_14900
DNA repair and recombination proteins [BR:
plz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
S4054249_14900
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
DNA_pol3_tau_5
AAA
RuvB_N
AAA_22
AAA_5
AAA_14
AAA_assoc_2
AAA_18
AAA_30
AAA_16
DNA_pol3_delta
AAA_7
TsaE
AAA_19
AAA_2
PIF1
AAA_24
nSTAND3
Rad17
TniB
SKI
Mg_chelatase
Motif
Other DBs
NCBI-ProteinID:
AOT09063
LinkDB
All DBs
Position
1:complement(3532885..3535413)
Genome browser
AA seq
842 aa
AA seq
DB search
MSYQVLARKWRPQSFHEMMGQEHVKQALINALNEQRLHHAYLFTGTRGVGKTTIARIFAK
SLNCEQGISSTPCGQCSTCEEIEAGKFIDLIEIDAASRTKVEDTREILDNVQYAPTRGRY
KVYLIDEVHMLSKHSFNALLKTLEEPPEHVKFLLATTDPQKLPITILSRCLQFNLNAMAK
GQIVEQLAKILPKENFQFEDDALSVLAKAADGSMRDALSLTDQAIAQTNGHLTVAAVQQM
LGLMDSAHAMLLMSAVLCQDGNALMAEVENIALKNGNFVSVIDDLIALLHIIQLTQLVPQ
AAHVGQFDQQQVKALAEEISPQTAQMLYQLLLSGKKDLSWAPDAKLGFEMVMLRLLAFEG
TDFSQTGVLPAATKVHQAQEKKSKAGALRDILNNNQKKTLNSEPEAHLAQPQARPANTAQ
QSALAQPMQAEPVQHAPHSTTTHVAQAETVHHAPSSTTTHVAQTEPEHHAPHSAPTHATQ
AEPIHNALHHASEHAESHSEAGRPTTPIAPHRAPLGGGSTPPEYEQQYNDIMAQAAAQGF
NEPTPESNGLPENTAQVSANADTSPGQLYAQKQGQAQSAIAKILQNRQISGAGKLLGGKE
TPKKPSSDNHIPKNNPTPSYEQRVEQPAPNNLPVEGEGTRIPDQAPVATKPHTPIPTRTK
TKKPEISERFKKDESKLAPELLEQLSPTPAKVDEQEHVIEMPVPENFTSPISSLKFAYEK
DDWANLIEKMALSGRVRQFALHAMYEKKGNLCVLKAEQNQQHLDSPMLRDKLQQSFTLAL
SEPVELQMEFVEQVQSTPFLIQQDIDQQRYLEAVDAVNSDPIIQTMVAEFDAVVNEKSVK
AL
NT seq
2529 nt
NT seq
+upstream
nt +downstream
nt
atgagctatcaggtcttagcaagaaagtggcggcctcaatcattccatgaaatgatgggt
caggaacatgtaaagcaggcattgattaatgccttaaatgagcaaaggttacatcatgct
tatttgtttacaggtacccgaggtgtgggcaaaacgactattgctaggatctttgctaaa
agcttgaattgtgagcaaggtatatcttctaccccgtgtgggcagtgcagtacttgtgaa
gagatcgaggcaggtaaattcatcgatctgattgagattgatgcggcatcaagaaccaaa
gtagaagatacgagggaaatattagataacgtccaatatgcaccaacgcgaggccgttac
aaagtctatttaattgacgaagtacacatgctgtcgaagcacagtttcaacgcattactc
aagacgttagaagagccgccagagcatgtgaagtttttactggccacgacggatccacaa
aagttaccaattacgattttatctcgctgtttacagtttaatttgaatgcgatggcgaaa
ggtcaaattgttgaacaactggcgaaaatattaccaaaagaaaacttccaatttgaagat
gatgcgttaagtgttttggctaaggctgccgatggtagtatgcgtgatgcactaagcctt
accgatcaagcaattgcacaaaccaatgggcatttgactgtagcagcagtacagcagatg
ctaggcctgatggatagtgcacatgcgatgttactcatgagtgctgtattgtgccaagac
ggtaatgctttgatggcagaagttgaaaacattgctttgaaaaatggtaactttgttagt
gtcattgatgacttaatagcgctattacacatcatccaattgacacaacttgtgccacag
gctgcacatgttggtcaatttgatcaacaacaagtgaaggctctggcagaagaaatttca
ccacaaacagcccagatgttataccagttgctattgagcggcaaaaaagatttaagctgg
gcgcctgatgctaagttaggctttgaaatggtaatgcttaggttgcttgcttttgaaggc
actgacttctcacaaaccggagttctccctgctgctactaaagtacatcaagcacaagaa
aaaaagtccaaagcaggtgcgttgcgcgacatattaaacaataaccaaaaaaaaacgtta
aatagcgaacccgaagcgcacttggctcaacctcaagctaggccagctaatactgcgcag
caaagtgcattggcgcaacccatgcaggcagaacctgttcagcatgcaccgcatagcaca
acgacgcacgtagcgcaggcagaaactgtacatcatgcaccgtctagtacaacgacgcac
gtggcgcagacagaaccagaacatcatgcaccgcatagtgcgcctacgcatgctacgcag
gcagaaccaatacataacgcattgcatcatgcatcagagcacgctgaatctcacagtgaa
gcaggtcggccaactacaccaatagctcctcatagagcccctttaggcggggggtctaca
ccgcctgaatatgaacaacaatataacgatatcatggcgcaagctgcggcacagggcttt
aacgagcctacgccagagagtaatggcttacctgaaaacactgctcaagtatctgcgaac
gctgatacatcaccaggccaactttatgcgcaaaagcaagggcaagcgcaatcagccatc
gccaaaattttgcaaaatagacagatttctggtgcaggaaagttattagggggcaaagaa
acgccaaaaaagcccagtagtgataatcacattcctaaaaacaatccaactccttcctac
gagcaacgggtagagcaaccggcaccaaacaacttgccagttgagggagagggaaccaga
atacctgatcaagccccagtcgctacaaagcctcacactccgattccaacgcgcactaaa
actaaaaagcctgaaatatcagagcgatttaagaaagatgagagtaagttagcgccagag
ttactggagcaactatcaccgactcccgcaaaagttgatgagcaagagcatgtaattgaa
atgcctgtgcctgaaaactttactagcccaattagcagcttgaagttcgcatatgaaaaa
gatgattgggcaaacttaatcgagaaaatggcgctcagtggtcgcgttaggcagttcgct
ttgcatgcgatgtacgagaaaaagggcaatctgtgtgtattaaaggctgagcaaaatcag
cagcatttagactcgcctatgcttagagataaattacagcagtcatttacgttggcctta
agcgagccggtagagctgcaaatggagtttgttgagcaggtgcaatctactccgttttta
atacaacaagatattgatcaacagcgatatttagaagctgtagatgccgtcaattcagac
cctattatccagacgatggtggctgaatttgatgcggtggtaaacgaaaaatcggtaaag
gcattgtaa
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