Providencia manganoxydans: JI723_12760
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Entry
JI723_12760 CDS
T08377
Symbol
cas3f
Name
(GenBank) type I-F CRISPR-associated helicase Cas3
Organism
pmag
Providencia manganoxydans
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cas3_I-F_Cas2
DEAD
ResIII
Cas3_HD
Motif
Other DBs
NCBI-ProteinID:
QQO61160
LinkDB
All DBs
Position
complement(2836179..2839721)
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AA seq
1180 aa
AA seq
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MIVTFVSQCEKYALKRTRRVLDAFANRIGDNTWQTLITAEGLETVKKMLRKSASRSTAVS
CHWIRSRSRTQLLWVVGNRKKFNSEGYVPVNRTEKSFLGREHENDWQYLSLIEAFAKLAA
LLHDWGKASRLFQDKLNPEIKTPFKGDPVRHEWVSSILFSALVKSQPNSENDENWLDVLS
TQQWDESQLQQWAKQNQQAGLPLSGLPDAASLLTWLILSHHRLPFLDVKQQQGDAKNGDR
LLLSQIGHKEANTLADMMTFIEQYWGYENKYHEQEFNQRLGMCFEFPNGLLSTSPIWTQA
IKQAAIHLKQQLPLFQQAMADGSWKIIAHYARLCLMLGDHNYSSKENDPQWKSDIPLYAN
THYVKENPLNKGMQFKQKLDEHLVKVAEIARDVAEQLPFFEGEPPTAGEVKKLTHQKNST
GPFSWQEDVVSTIHKYREQQDDIKGYFIVNMASTGCGKTRANAKVMQALSEDKQSLRFIL
ALGLRTLTLQTGDEYKDSIGLEEDELAVLVGSKAVTQLHHHAADADNSAKDDDNAENKTK
PQDIGSESQETLFDDDEEVLLWQEDKWQGALPEEALSTVLTKAKDRALLYAPVLACTIDH
IMGATETTRGGRYILPSLRLMSSDLVIDEVDDFSDDDLIAIGRLIHFAGLLGRKVMISSA
TIPPDTALAYFHAYQSGWYIHAKSRQQPLQIGCIWMDEGKYNSAKDQCQATTQIATITAN
DVNSVYLYQQYHDQFVDKRAEVLQSLPARRKALIVPMPIEQGKNSQKRFFEHIQAAILTQ
HEHHHFVDQQTGIQLSFGVVRVANISPCVELTRFLLECEWPENIEIRTMAYHSRQVLLLR
HEQEQHLDKVLKRKEKMGEQPIALADPIIRQHLTETQGKAKNLIFILVATPVEEVGRDHD
FDWAVVEPSSYRSIIQVSGRVRRHREGEVEQPNVSLLQYNWKGFQGKEKYVFVRPGYENS
AIKLKTHNLSELVDEQQLRKSINSLPRIKKPTNVEGTKSCNFASLEHASISYTLKTNCLF
PTEQVGKTVKTHQRRRSRANSSAMVRVNTASHLWGYTHGCWWMTAIPVQLAPFRKNSLSI
RLSLVISNRGKPEFWEYDRVSGWVTKDSVSGVQYVDFPKSLKERLWLVRDYQQSIYQHSQ
DEGQLTSISRLYGEVSFLKRDNDNHNYQYDDQMGIYEVER
NT seq
3543 nt
NT seq
+upstream
nt +downstream
nt
atgatcgtgaccttcgtttcacagtgtgaaaaatacgctttaaaaagaacacgccgagta
ctcgatgcgtttgcaaatcgtattggtgataacacatggcagacacttatcaccgctgag
ggactagaaacggtcaaaaaaatgctccgaaaaagtgccagtcgtagcacagcggttagc
tgccattggatacgctctcgctcacgaacgcaactgttgtgggttgtaggcaaccgtaaa
aaatttaactcagaaggatatgtacctgttaatcggacagaaaaatcctttcttgggcgc
gaacatgaaaatgattggcagtacctttctctcatagaagcttttgctaaattagcagca
ctcctacatgattggggcaaggcatcgcgcctatttcaagataaacttaacccagagatt
aaaacgccttttaaaggtgatccagtaaggcatgaatgggtttcatcaatactgtttagc
gcattagtgaaaagccaacctaatagtgaaaatgatgaaaactggctcgatgtactgagt
acgcaacaatgggatgaatcacaattacaacagtgggcgaaacagaatcaacaagcggga
ttgccactatcagggctacccgatgccgcatcattattaacgtggctaattttatcccat
catagactgccttttttagatgttaaacagcaacagggtgatgctaaaaatggtgaccgt
ctactgttaagccaaataggccataaagaagctaatacactggcagatatgatgacattc
attgaacagtattggggttatgaaaataaatatcatgagcaggaatttaaccagcggcta
ggcatgtgttttgaatttccaaatggcttattaagtacgtcaccaatatggactcaagcg
attaaacaagctgcgatccacttaaaacagcaattgcctctatttcaacaagctatggct
gatggtagctggaaaatcattgcccattatgcacgcctttgtctcatgttaggggatcat
aattactcttcaaaagaaaatgacccacagtggaaaagcgatattcccctttatgcgaat
actcattatgtaaaagagaatccactcaataaaggtatgcaatttaaacaaaaactggat
gagcacctcgttaaggttgctgaaattgctcgcgatgtggcggaacaattaccttttttt
gaaggggagccacctacagcgggcgaggttaaaaaattaactcatcaaaaaaacagcacc
gggccatttagctggcaagaagatgtcgttagcacaattcataaataccgtgaacaacaa
gacgatataaaaggctattttattgtcaatatggccagcacaggttgtggtaaaacgcga
gcaaatgcaaaagttatgcaagcattatcagaagataagcaaagcttacgttttatactc
gcattggggttgcgaacactcacattacaaacaggtgatgaatacaaagacagtattggg
ctagaggaagatgaactggctgtattagtcggttctaaagctgtcactcaattacatcat
catgcagctgatgctgataacagcgcgaaagatgatgataatgctgaaaataaaactaag
ccacaagatataggctctgaatcacaggaaacattatttgatgacgacgaagaagtgctc
ttatggcaagaggataagtggcaaggcgctctccctgaagaagcattatcaactgtatta
accaaagcaaaagatagagcgttgctctatgcgcctgttttggcttgtactattgaccat
attatgggcgcgacagaaaccactcgtggtggccgttatattttgccaagtttacgttta
atgtcatctgaccttgtcattgatgaagtggatgattttagcgatgatgatcttattgct
atcggccgtttgatccacttcgctggcctgcttgggagaaaggtgatgatctcttcggca
accatccctcctgatactgctttagcctattttcatgcttatcaatcaggctggtatatt
catgctaaaagccgacaacagccattacaaattggttgcatatggatggacgaaggtaaa
tataattcagcgaaagatcagtgccaagcgacaacacaaattgcgaccatcacggcaaat
gatgtgaattcagtgtacttatatcagcaatatcacgatcaatttgttgataaacgtgct
gaggttttacagtcactacctgctcgccgtaaagcgttaattgtaccgatgccgattgag
caagggaaaaatagtcagaagcgcttttttgagcatattcaagcagccattttaacgcaa
catgaacatcatcattttgttgatcagcaaacgggtattcaactttcatttggtgtggta
cgagtagccaatatcagcccttgtgttgaattgacacgttttttacttgaatgtgaatgg
cctgaaaatattgaaattcgcacaatggcgtatcacagtcggcaggtgttattactgcgt
catgaacaagaacagcatttagataaggtgcttaaacgtaaagaaaaaatgggtgaacaa
cctatcgcacttgccgatcctattattcgtcagcatttaactgaaactcaaggcaaggct
aagaacttgatctttattcttgttgctacacctgttgaggaagtaggacgcgatcatgac
tttgattgggcggttgtcgaaccgtcgtcatatcgttctatcattcaggtatcagggcgg
gtacgtcgccatcgcgaaggcgaggtcgaacagccgaatgtgtcattattgcaatataat
tggaaaggttttcaaggtaaggagaaatatgtttttgttcgtccaggttatgaaaatagt
gcgataaaactcaaaacgcataatttaagtgaactggttgatgagcaacagttaagaaaa
tcaattaattcactgcctcgaataaaaaaaccaaccaatgttgagggcactaaaagttgt
aatttcgccagtttagagcatgcatcgattagttatacgttgaaaaccaactgccttttt
ccaactgagcaagttggaaaaacagtcaaaacacatcaaagaaggcgttcacgcgcaaat
tcatctgctatggttcgagttaatacggcatctcatttatggggctatacccacggttgc
tggtggatgacggcgatacccgtgcaattagcaccttttcgtaaaaactcattatcgatt
cggctttcattagtgatttcaaatagaggaaaacctgaattttgggagtatgaccgagtt
agcggatgggtcacgaaagatagtgtgtcaggtgttcagtacgttgattttcctaaatcg
ttgaaagaaagattatggctagtgagggattatcagcaatcaatttatcaacatagtcaa
gatgaggggcaactcacgtcgatttcacggctatacggtgaggttagctttttgaagcgt
gataatgataaccataattatcaatatgatgaccagatggggatttacgaagtagaaaga
taa
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