Paenibacillus marchantiae: PTQ21_11680
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Entry
PTQ21_11680 CDS
T08974
Name
(GenBank) Ku protein
KO
K10979
DNA end-binding protein Ku
Organism
pmah
Paenibacillus marchantiae
Pathway
pmah03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
pmah00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
PTQ21_11680
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pmah03400
]
PTQ21_11680
DNA repair and recombination proteins [BR:
pmah03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
PTQ21_11680
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
CDC24_OB3
Motif
Other DBs
NCBI-ProteinID:
WDQ34863
LinkDB
All DBs
Position
complement(2589562..2590473)
Genome browser
AA seq
303 aa
AA seq
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MHTVWKGAISFGLVHVPVKMFSATEDKDISMRYIHKVCGSPLAYVRKCPSCEVEVQWEEI
TKGYEYEKGKFVLFEKDELEALNDSSSKTITILDFVDLTEIDPIYFQKTYYLSPDQAGGN
AYQLLMTAMRDTGKIGIAKISIRSKSSLAAIRVLDDCLSMETIFYPDEIRPVSQVPNLPE
VLNVNEKELTMAKLLIDQLSTPFEPGKYTDDYRAKLLDLINHKVAGEEIKIAPAKPEANV
MDLMAALQASIEAVKPIPTDPGTTTAKPKKRAPKKTSVQAVAGGEAEAPAPSKRKKATPK
PKA
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atgcatacggtctggaaaggtgcaattagctttggtctggttcatgttcctgtcaaaatg
ttttcggctaccgaagacaaagacatctccatgcgttacattcacaaagtctgcggcagc
ccactcgcttatgtacgtaaatgtccttcctgcgaagttgaggttcaatgggaagagatc
accaaaggatatgaatatgagaaaggcaaattcgtcttattcgaaaaggacgagcttgaa
gcgttaaatgattccagcagcaaaaccattaccattctggatttcgtagatttaacggag
atcgatccgatttattttcaaaaaacgtattacctctcccccgatcaagcgggaggaaac
gcctaccagctattaatgactgccatgagggatacaggaaagattggcatcgccaagata
tccattcgctccaaaagcagtttggccgcgatccgtgtactggacgattgcctctctatg
gaaaccattttctatccggacgagatccgtcccgtctctcaggttcccaacttgcccgag
gtcctgaacgtaaacgaaaaggagttgacgatggcgaaactgctgatcgatcagttatcc
actccttttgaacctggtaaatatacagacgactaccgcgccaaattgctggatctgatc
aatcacaaagtagccggtgaagaaatcaaaattgcccctgccaagcctgaagcgaatgtc
atggatctcatggcagcgctgcaagcaagtattgaagctgtgaagcccattccaaccgat
cccggaaccaccacagccaaacccaaaaaacgtgctcctaagaaaacttcggtccaagca
gtggctggaggagaggcagaggctcctgctccttcgaaaagaaagaaggctacgcctaag
cctaaggcttaa
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