Pseudomonas marincola: PMYSY11_2800
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Entry
PMYSY11_2800 CDS
T07318
Symbol
fadB
Name
(GenBank) dodecenoyl-CoA delta-isomerase, enoyl-CoA hydratase, 3-hydroxybutyryl-CoA epimerase, 3-hydroxyacyl-CoA dehydrogenase
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
pmao
Pseudomonas marincola
Pathway
pmao00071
Fatty acid degradation
pmao00280
Valine, leucine and isoleucine degradation
pmao00310
Lysine degradation
pmao00362
Benzoate degradation
pmao00380
Tryptophan metabolism
pmao00410
beta-Alanine metabolism
pmao00640
Propanoate metabolism
pmao00650
Butanoate metabolism
pmao00907
Pinene, camphor and geraniol degradation
pmao00930
Caprolactam degradation
pmao01100
Metabolic pathways
pmao01110
Biosynthesis of secondary metabolites
pmao01120
Microbial metabolism in diverse environments
pmao01200
Carbon metabolism
pmao01212
Fatty acid metabolism
Module
pmao_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
pmao00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
PMYSY11_2800 (fadB)
00650 Butanoate metabolism
PMYSY11_2800 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
PMYSY11_2800 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
PMYSY11_2800 (fadB)
00310 Lysine degradation
PMYSY11_2800 (fadB)
00380 Tryptophan metabolism
PMYSY11_2800 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
PMYSY11_2800 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
PMYSY11_2800 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
PMYSY11_2800 (fadB)
00930 Caprolactam degradation
PMYSY11_2800 (fadB)
Enzymes [BR:
pmao01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
PMYSY11_2800 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
PMYSY11_2800 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
PMYSY11_2800 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
PMYSY11_2800 (fadB)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
Motif
Other DBs
NCBI-ProteinID:
CAE6926742
LinkDB
All DBs
Position
PMYSY11:complement(2910262..2912409)
Genome browser
AA seq
715 aa
AA seq
DB search
MIYEGKAITVKALESGIVELNFDLKGESVNKFNRLTLNELRQSVDAIKADGSIKGVIVTS
GKDVFIVGADITEFVENFKLPDEELVAGNLEANKIFSDFEDLNVPTVAAINGIALGGGFE
MCLAADYRVMSATAKVGLPEVKLGIYPGFGGTVRLPRLIGTDNAIEWIAASKENRAEDAL
KAGAVDAVVAPDKLQAAALDLIKRAISGELDFKAKRQPKLDKIKLNAIEQMMAFETAKGF
VAGQAGPNYPAPVEAIKTIQKAANFGRDKALEVEAAGFVKLAKTSVAASLIGLFLNDQEL
KKKAKHHDEIAKDVKLAAVLGAGIMGGGIAYQSAVKGTPILMKDIREDGIQTGLNEASKL
LGKRVEKGRLTPAKMAEALNAIRPTMSYGDFGNVDIVVEAVVENPKVKQAVLAEVEGVVR
EDAILTSNTSTISISLLAKALKRPENFCGMHFFNPVHMMPLVEVIRGEKSGDVAIATTVA
YAKKMGKTPVVVNDCPGFLVNRVLFPYFGGFSKLLEFGVDFTRIDKVMEKFGWPMGPAYL
SDVVGIDTGHHGRDVMAEGFPDRMAVEGRTAVDVMYEADRLGQKNGKGFYAYETDKRGKP
KKVVDPQSYELLKQIIREERELTDEDIINFMMIPLCMETVRCLEDGIVDTAAEADMGLIY
GIGFPPFRGGALRYIDSIGVAEFVALADKYAELGALYQPTEKLREMAKNGQKFFG
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgatttacgaaggtaaagccatcacggttaaggctcttgagagtggcatcgtcgaattg
aatttcgacctcaagggtgagtccgtcaacaagttcaaccgtctaacccttaacgagctg
cgtcagagcgttgatgcaatcaaggccgatggttcgatcaaaggcgtgattgttaccagc
ggcaaagacgtattcatcgtcggcgccgatatcaccgagttcgttgaaaacttcaagctg
cctgatgaagagctggttgccggcaaccttgaagccaacaagattttcagcgacttcgaa
gacctcaatgttccgacagttgcagccatcaacggcatcgcactgggcggcggcttcgaa
atgtgcctggctgcggattaccgcgtcatgtcggccaccgctaaagtcggcctgccagaa
gttaagctgggcatctacccgggcttcggcggcactgtgcgcctgccacgcctgatcggt
actgataacgccatcgagtggattgctgcgagcaaagaaaaccgtgctgaagacgccctc
aaagcaggcgctgtcgatgctgtggttgctccggacaagctccaggccgcagctctggac
ctgatcaagcgcgccatttccggcgagctggatttcaaggccaagcgtcagccgaagctg
gacaagatcaagctcaatgcgattgagcagatgatggcatttgaaaccgccaagggtttt
gttgccggtcaagctggcccgaactacccggcgccggttgaagcgatcaaaaccattcag
aaagctgcaaacttcggccgcgacaaagcgctggaagttgaagctgcaggcttcgtcaaa
ctggccaagacttcggtcgctgccagcctgatcggcctgttcctgaacgatcaggaactg
aagaaaaaagccaagcaccacgacgaaatcgccaaagacgtgaaactggctgccgtactc
ggcgctggcatcatgggcggcggtatcgcctatcagtcggctgtaaaaggcacgccgatc
ctgatgaaggacatccgtgaagacggtatccagactggcctcaacgaagcgtccaagctg
cttggcaaacgcgttgagaaaggccgtctgactccggcgaaaatggctgaggcgcttaac
gctattcgtccgaccatgtcttacggcgatttcggcaacgtcgatatcgttgtagaagcc
gttgtcgagaacccgaaggtcaagcaagccgtattggctgaagttgaaggcgtggtgcgt
gaagacgccattctgacctccaacacctcgaccatttccatcagcttgctggccaaggcc
ctcaagcgtccggaaaacttctgcggcatgcacttcttcaacccggtacacatgatgccg
ctggttgaggttattcgtggcgagaagtcgggcgacgtggctatcgcgactactgttgcc
tacgccaagaagatgggtaagaccccggttgtggttaatgattgcccaggcttcctggtc
aaccgtgtactgttcccgtacttcggtggtttctccaagctgcttgagttcggcgttgat
ttcacccgtatcgacaaggtcatggaaaagttcggctggccaatgggcccggcgtacctg
tctgacgttgtcggcatcgacactggccaccacggccgtgacgtaatggctgaaggcttc
ccggatcgcatggctgtagaaggccgtaccgcggtagacgtgatgtacgaagccgatcgc
cttggccagaagaatggcaaaggtttctacgcttacgagactgacaagcgcggcaagccg
aagaaagtcgttgatccgcagtcgtatgagctgctcaagcagatcatccgcgaagaacgc
gaactgactgacgaagacatcatcaatttcatgatgattccgctgtgcatggaaaccgta
cgctgcctcgaagacggcatcgtggataccgctgccgaggccgatatgggcctgatctac
ggtattggcttccctccattccgtggtggtgcgctgcgttacatcgacagcattggtgtt
gccgaattcgttgccctggccgacaagtatgccgaactgggtgcgctgtaccagccgacc
gaaaaactgcgtgaaatggctaaaaacggccagaagtttttcggttaa
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