KEGG   Pelagerythrobacter marinus: NCF86_01735
Entry
NCF86_01735       CDS       T08297                                 
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
  KO
K03089  RNA polymerase sigma-32 factor
Organism
pmas  Pelagerythrobacter marinus
Brite
KEGG Orthology (KO) [BR:pmas00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pmas03021]
    NCF86_01735 (rpoH)
Transcription machinery [BR:pmas03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     NCF86_01735 (rpoH)
SSDB
Motif
Pfam: Sigma70_r2 Sigma70_r4 Sigma70_r1_2 Caudo_TAP
Other DBs
NCBI-ProteinID: USA39907
LinkDB
Position
complement(327538..328443)
AA seq 301 aa
MSNNKALSVPTLGGEQSLNRYLSEIKKFPVLTAEQEYMLAKRYEEHDDPEAAAQLVTSHL
RLVAKIAMGYRGYGLPVSDLISEGNVGLMQGVKKFEADRGFRLATYAMWWIKASIQEFIL
RSWSLVKMGTTAAQKKLFFNLRRMKRNLDAYEDSDLHPDDVAKIATDLGVPEQEVINMNR
RMMMGGDGSLNSPMRGGEEGSGEWQDWLTDERPLQDETVAEAEEADVRHEMLVEAMDSLN
EREKHILTERRLTENPQTLEELSQVYNVSRERIRQIEVRAFEKLQKAMQRIAGERLLPGV
A
NT seq 906 nt   +upstreamnt  +downstreamnt
gtgagcaacaacaaggcattgagcgttccgacgctcggcggtgagcagagcctcaaccgc
tatctttccgaaatcaagaaattccccgtgctgacggccgagcaggaatacatgctcgcc
aagcgttacgaggaacacgacgatcccgaggcagccgcgcaactggtgaccagccacctg
cgcctggtggccaagatcgccatgggataccgcggctacggcctgccggtcagcgacctc
atctccgaaggcaacgtcgggctgatgcagggcgtcaagaagttcgaggccgatcgcggg
ttccgcctggcgacttacgccatgtggtggatcaaggcctcgatccaggaattcatcctg
cgctcttggtcgctggtgaagatgggcacgaccgcggcccagaagaaactgttcttcaac
ctgcggcggatgaagcgcaacctcgacgcctacgaggattcggaccttcatcccgacgac
gtggcgaagatcgcgaccgatctcggcgtgcccgagcaggaagtgatcaacatgaaccgc
cggatgatgatgggcggcgacgggtcgctcaactccccgatgcgcggcggcgaggaaggt
tcgggcgaatggcaggactggctgaccgacgagcggccgctgcaggacgaaaccgtcgcc
gaggcggaagaagccgacgtccggcatgaaatgctggtcgaggcgatggacagcctgaac
gagcgtgagaagcacattctcaccgaacggcggctgaccgagaacccgcagacgctggaa
gagctgagccaggtctacaacgtcagccgcgagcgtatccgccagatcgaggtgcgcgcg
ttcgagaaactgcagaaggcgatgcagcgcatcgccggcgaaaggctgctgcccggggtc
gcctga

DBGET integrated database retrieval system