KEGG   Pseudoalteromonas maricaloris: R5H13_09070
Entry
R5H13_09070       CDS       T09524                                 
Symbol
tssC
Name
(GenBank) type VI secretion system contractile sheath large subunit
  KO
K11900  type VI secretion system protein ImpC
Organism
pmaz  Pseudoalteromonas maricaloris
Brite
KEGG Orthology (KO) [BR:pmaz00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:pmaz02044]
    R5H13_09070 (tssC)
Secretion system [BR:pmaz02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   R5H13_09070 (tssC)
SSDB
Motif
Pfam: VipB VipB_2 Virulence_RhuM
Other DBs
NCBI-ProteinID: WOX30391
LinkDB
Position
1:2086295..2087821
AA seq 508 aa
MNMQETLNVEARKEETLTASAYETICNLVSIEPVSSEISIDNFRDANNLAETDTNERLTA
AINVFLDMATNDSKEVSRIDKLLLDDYIAKVDKIISEQLDEILHHPQFQKVESAWRSLRY
LVNRCPNNSNVKLELLDVDKETLRDDFEEAPDTTQSALYKQVYTAEYDTPGGEPISTMVS
NFEFDCSAPDVSLLQEISRVSAAAHCPFLGSVGAKFFLKDSLEEVSKIQDLGSYMERAEF
LRWKNFRESEDARYIGLAFPRFLLRLPYGDLNPIRHFNYQEDVSSEHHERYLWGNATFAF
AANIVRSFHQNGWAVNIRGPQSGGRVENLPLHSFEAGRGQETKIPTEVLISETKELEFAN
QGFIPLSYYKNSDFACFFSANSAQKPQIFETPEATSNSRINARLPYIYLVSRIAHYMKVI
QRENIGSSKPRHELEQQLNDWLGALVTKMNNPDESLIATHPLKDANVTVSEIPGNPGYYR
VNTYVVPHFQVEGIDVRLALVGQMPGEK
NT seq 1527 nt   +upstreamnt  +downstreamnt
atgaatatgcaagaaacgttaaacgttgaagcacgcaaagaagagactttgacagcttca
gcttacgaaacaatctgtaatcttgtgtctattgagccggtttcaagtgaaatcagcatt
gataacttccgtgatgctaataatcttgcggaaacagacaccaatgagcgcttaactgct
gctatcaatgtctttttagacatggccactaatgacagcaaagaagtgtcgcgtatcgac
aagttattacttgatgactacatcgctaaagtcgacaaaattatttctgaacagctggac
gaaattttacatcatccacagtttcaaaaagtagagtcagcatggcgttcactgcgttat
ttggtgaatcgttgtccaaataactcaaacgtaaagcttgaactacttgatgttgataaa
gaaacactacgtgacgacttcgaagaagcaccagataccacgcaatctgcgctctataag
caagtatatacggctgagtatgacacaccaggtggcgagccaatttcgactatggtgtca
aactttgaatttgattgttcagcgccggatgtgtcgttattgcaagaaatttcaagggtc
tctgcagcagcccactgtcctttcttaggcagtgttggtgctaagttcttcttaaaagat
tcgcttgaagaagtgtctaaaattcaggatttgggctcttacatggagcgtgctgagttt
ttacgttggaagaacttccgtgaatcagaagatgcacgttacattggcttagcgttccca
cgcttcttactgcgcttaccatatggcgacttaaacccaattcgtcactttaactatcaa
gaagacgttagcagtgagcatcatgaacgttatctatggggtaacgcgacatttgcgttc
gcggcaaatatcgtccgtagcttccaccaaaatggttgggcggtaaatattcgtggtcca
caatctggtggtcgcgttgaaaatctacctctgcattcttttgaggcaggtcgtggtcaa
gaaactaagatcccaacggaagtacttatttctgaaaccaaagagcttgagtttgcaaac
caagggtttatccctctgagctattacaaaaacagtgactttgcatgtttcttctctgca
aacagtgcgcaaaagccacaaatttttgagacgccggaagccacctctaactcgcggatc
aatgcaagattaccatacatctacttggtatcgcgtattgcgcactatatgaaggtgatc
caacgtgaaaatatcggttcaagcaaacctcgtcacgaacttgagcagcaacttaatgat
tggttaggtgcattagttactaagatgaataatccagacgagtctctaattgcgacgcac
ccgttaaaagatgccaacgtgactgtgtcggagatcccgggtaatcctggttattaccgt
gtgaatacgtatgtggttccacatttccaagtggaaggtatcgacgtacgcctcgcactc
gttggtcaaatgcctggcgaaaagtga

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