Polymorphobacter megasporae: KTC28_14425
Help
Entry
KTC28_14425 CDS
T08573
Name
(GenBank) RsmB/NOP family class I SAM-dependent RNA methyltransferase
KO
K03500
16S rRNA (cytosine967-C5)-methyltransferase [EC:
2.1.1.176
]
Organism
pmea
Polymorphobacter megasporae
Brite
KEGG Orthology (KO) [BR:
pmea00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pmea03009
]
KTC28_14425
Enzymes [BR:
pmea01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.176 16S rRNA (cytosine967-C5)-methyltransferase
KTC28_14425
Ribosome biogenesis [BR:
pmea03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
KTC28_14425
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltr_RsmB-F
FtsJ
Ubie_methyltran
Methyltransf_25
Methyltransf_31
Methyltransf_3
Methyltr_RsmF_N
Methyltransf_15
Motif
Other DBs
NCBI-ProteinID:
UAJ09497
LinkDB
All DBs
Position
complement(3088274..3089461)
Genome browser
AA seq
395 aa
AA seq
DB search
MTPGARVQAAIECIDLIADAARDSGAAADTIIARYFAARRYAGSKDRRAVRDLIYDVVRS
IGDRPASGRGALIGHARANAPQLLALFGGIGHTPAALVHNEISSATNPAPGWLVEKLERR
FGADTPRQVAALLGRAPLDLRVNTLQTTRDAVHIEGAEPTRFAANGLRTTLPLAVETTPQ
FLAGEIEIQDEGSQIAAAVCGAEPGMTVVDLCAGAGGKTLALAAAMQNDGRLIATDTDRG
RLDRMGPRLDRAGVSIVERRLLNPGAERDKLTDLREAADLVVIDAPCSGTGTWRRNPEAR
WRLTPARLDRLNEAQARLLDLGSTLVKSGGVLVYIVCSLLPEEGEAQIAAWLRRNATFKS
VMFSNPTGGEAVNSLVLTPGAHGCDGFYIARLTRV
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atgacccccggggcccgcgttcaggcggcgatcgaatgcatcgacctgattgccgatgcc
gcgcgtgacagcggagccgctgccgacacgatcatcgcgcgctatttcgcggcacgccgc
tacgccgggtcgaaagaccgccgcgcggttcgcgacctgatctacgacgtcgtccgcagc
atcggcgatcgccccgcgagcgggcgcggcgcgttgatcggacacgctcgcgccaacgca
ccgcagttgctcgcgctgttcggcgggatcgggcacacgccggcggcgctggtccacaac
gagatttcatccgcgaccaatcccgcgccgggctggctcgtcgagaagctcgagcgccgc
ttcggggccgatacgccacgtcaggtcgcggcgctgcttgggcgggcaccgctcgatctg
cgggtcaacacgctgcagacgacgcgcgatgccgtccatatcgaaggggccgagccgacg
cgcttcgccgccaacggcctgcggacgacgttgccgctcgctgtcgaaacgacgccgcag
ttccttgccggcgagatcgagattcaggacgagggcagccagatcgccgccgcggtctgc
ggggccgagcccggcatgaccgtcgtcgacctgtgcgccggggcggggggcaagaccctc
gcgcttgccgccgcgatgcaaaacgacgggcgcttgatcgccaccgacaccgatcgcggg
cggctcgaccgcatggggccgcgcctcgaccgtgccggggtatcgatcgttgagcggcgg
ctgctcaacccgggggccgagcgcgacaagctgaccgatcttcgtgaagccgccgatctc
gttgtcatcgacgcgccgtgttcggggacgggaacgtggcggcgtaaccccgaggcgcgc
tggcggctgaccccggcgcggctcgaccggctcaacgaggcgcaggcgcggctgctcgat
ctcggctcgacgctcgtcaaatccggtggcgtgctcgtctatatcgtctgctcgctgctc
cccgaggaaggtgaggcgcagattgccgcatggcttcgccgcaacgcaacatttaaatcc
gtgatgttcagcaacccgacagggggcgaggccgtaaacagcctcgtgctgacaccgggg
gcccacgggtgcgacggattctacatcgcgcgactgacccgggtctga
DBGET
integrated database retrieval system
