KEGG   Pseudomonas mediterranea: E3Z27_10925
Entry
E3Z27_10925       CDS       T08284                                 
Symbol
traD
Name
(GenBank) type IV conjugative transfer system coupling protein TraD
  KO
K12071  conjugal transfer pilus assembly protein TraD
Organism
pmed  Pseudomonas mediterranea
Brite
KEGG Orthology (KO) [BR:pmed00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:pmed02044]
    E3Z27_10925 (traD)
Secretion system [BR:pmed02044]
 Type IV secretion system
  Conjugal transfer pilus assembly protein
   E3Z27_10925 (traD)
SSDB
Motif
Pfam: TraG-D_C TrwB_AAD_bind DUF87
Other DBs
NCBI-ProteinID: QHA82164
UniProt: A0A6I6PWX6
LinkDB
Position
complement(2462256..2464361)
AA seq 701 aa
MAEHAMESKLRPAVELYTVAICIAAVVLCLYSPWAVALSPEIGRVATLAYALFGLIRLRQ
AWEVLRYRRNIRRLPRYELTSRQIPVSRKRLFMGRGFRWTRLHTQRLVEAQDPAVAHYVD
QPAHYRLARGLERRLEHAPFPLSTLARVTAWDSAFNPLRPIPPVGGSPLLHGVEPNETEV
SLPLGERVGHTLVLGTTRVGKTRLAEVYITQDIHRIEHEVVIVFDPKGDADLLKRMYVEA
KRAGREKEFYVFHLGWPEISARYNAVGRFGRISEVASRIAGQLSGEGNSAAFREFAWRFV
NIIARALIELGRRPDYLQIQRHVVNIDALFIEYAQQFFAKTDPKAWEVIVQLEGKLTEKN
IPRHMVGREKRVVAIEQYLAVKRVFDPVMDGLRSAVRYDRTYFDKIVASLLPLLEKLTTG
KTAQLLAPNYTDLDDPRPIFDWMQIIRKRGIVYVGLDALTDAEVAAAVGNSMFADLVSVA
GHIYKHGIDHGLPQSGSTGDKLPINLHADEFNELMGDEFIPLINKGGGAGIQVTAYTQTL
SDIEARIGNRAKAGQVIGNFNTLQMLRVRETATAELLTQQLPKVNVLTKTLVSGATDTSD
PEANTDFTSSSQDRISSTSVPLIESAHIVSLPKGQMFSLQAGGQLWKVRMPLPKPSDEDA
MPKDLQELTQRMRATYNEQPGQWWSASGGGPTTNFDLDQVG
NT seq 2106 nt   +upstreamnt  +downstreamnt
atggccgaacatgcgatggagtccaagctccggcccgcggtggagctgtacaccgtagcg
atctgcatcgccgccgtggtgttgtgcctgtactcgccctgggccgtggcgctgtcaccg
gagatcgggcgggttgcgacgctggcctatgccctgttcggccttatccgcctgcgacaa
gcctgggaggtgttgcgctatcggcgcaatatccgccggctgccccgctacgagctaacc
agccggcagattccggttagccgtaagcgtctgttcatgggccgcggctttcgctggacc
cgcctgcacacccagcgcttggtcgaggcccaagacccggcggtcgctcactatgttgac
caaccggcccattaccgcctggcccgtggactcgaacgacggctggagcatgcaccgttt
ccgctctcgacactggcccgtgtcactgcttgggacagtgccttcaatccgttgcgccct
atccccccagtcggtggctcgccgctgctgcatggggtcgagcccaatgaaacggaagtc
agtctgccgctgggcgaacgggtcggacacaccctagtgctaggcaccacccgtgtcggt
aagacgcggctcgccgaggtgtacatcacccaggatattcatcgtatcgaacatgaagtg
gtcatcgtcttcgatccaaagggtgatgccgacctgctcaaacgcatgtacgtcgaagcc
aaacgcgccggtcgagagaaggagttttatgtcttccatctcggctggccggagatctcg
gcccggtacaacgccgtggggcgttttggacgtatttcggaagtggcatcgcgcatcgct
gggcaactcagtggcgaaggcaactccgcagcctttcgcgagttcgcctggcgctttgtc
aacatcattgcccgggctttgatcgagctgggccgacgtccggactacctccagatccaa
cgacatgtggtcaatatcgatgcgttgttcatcgagtacgcccaacagttttttgccaaa
accgatccgaaagcgtgggaagtgatcgtccagctggaaggcaagctcaccgagaagaac
attcccaggcatatggtgggacgcgaaaagcgggtggtggccatcgagcagtacctagcg
gtgaaacgggtatttgacccagtaatggacggattgcgttcggcggtacgatatgaccgt
acttacttcgacaaaatcgttgcctcactactgccactgctggagaaactcaccaccggt
aagactgcccaattgctggccccaaactacaccgacctagatgacccgcggccgatcttc
gactggatgcagatcatccgaaaacgcggcatcgtctacgtcggcctggatgcactcacc
gacgccgaggtggccgccgctgtgggcaactcaatgttcgccgatttagtatcggtcgcg
ggacatatctacaaacatggcattgaccatggcttgccccaatcgggcagcaccggtgac
aagctaccgatcaacctgcacgctgatgagtttaacgagttgatgggcgatgagttcatc
ccgctgatcaacaagggcggcggagcggggatccaggtaacggcttatacccaaaccctt
agcgatatcgaggcacgcattggcaaccgggccaaagccggtcaagtgattggcaacttc
aacaccctgcagatgcttcgcgtacgcgagacagccaccgcggagctgctcacccagcaa
ctgcccaaggttaacgtgctgaccaagaccctggtgtcgggtgccacagacacctccgat
ccggaggccaatacagacttcacttcgtcctcgcaggatcgcatcagcagcaccagtgtg
ccgctgatcgagtcggcacatatcgtcagtttacccaaggggcaaatgttctcccttcag
gctggtgggcagctctggaaggtccgtatgccgttgcctaagccctccgacgaagatgcc
atgcccaaggacctgcaggagcttactcagcggatgcgggccacctacaacgagcaaccg
gggcaatggtggagtgcgagcggtggtggcccaacaacaaactttgacctggatcaggtg
gggtag

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