Pseudomonas mediterranea: E3Z27_13530
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Entry
E3Z27_13530 CDS
T08284
Name
(GenBank) Ku protein
KO
K10979
DNA end-binding protein Ku
Organism
pmed
Pseudomonas mediterranea
Pathway
pmed03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
pmed00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
E3Z27_13530
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pmed03400
]
E3Z27_13530
DNA repair and recombination proteins [BR:
pmed03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
E3Z27_13530
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
Motif
Other DBs
NCBI-ProteinID:
QHA82623
UniProt:
A0A6I6Q966
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All DBs
Position
complement(3105054..3105944)
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AA seq
296 aa
AA seq
DB search
MARAIWKGAISFGLVHIPVALVSATSSQGVDFDWLDKRSMDPVGYKRVNKVTGKEVTKED
IVKGVEYQKGQYVLLSEEEIRSAHPKSTQTIDIFSFVDSEKIPLQNIDTPYFLAPDKRGG
KVYALLRETLIKTNKVALAHVVLHTRQHLAALMPLESALVLVMLRWPAEVRGLDILELGD
EVTKPNLVKGELEMAKRLVQDMSADWEPQDYRDSFQDKIMELVEKKANEGRLEAVETDPG
EEQRKTADVIDLTELLKRSLGSKGKPADKPAAKASAKAAKTSKSAPAKKATKASRG
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
atggcacgggcaatctggaaaggcgcaatcagtttcgggctggtccacattcccgtggcg
ctggtctcggcgacgtcgtcccaaggtgtggatttcgactggttggacaagcgcagcatg
gatccggtgggctacaaacgggtcaacaaggtcacgggaaaggaggtgaccaaggaagac
atcgtcaagggcgtcgagtaccagaaaggccaatacgtgctgctcagcgaagaggaaatc
cgctccgcccaccccaagtccacccagaccatcgatatcttttccttcgtcgacagcgag
aagatcccgctgcagaacatcgatacgccctacttcctcgcccccgacaagcgtggcggc
aaagtctacgcgttgcttcgcgaaaccctgatcaagaccaacaaggtggccctggcccac
gtcgtgctgcatacacgtcaacacctggcggcgctgatgcccctggagtcggctctggtg
ctggtgatgctgcgctggccggcggaggtgcgtgggctggacatcctggagctgggtgac
gaggtcaccaagccgaacctggtcaaaggcgagctggaaatggccaagcgcctggtgcaa
gacatgagcgccgactgggaaccccaggattatcgagacagtttccaggacaagatcatg
gagctggtggagaaaaaggccaacgagggccggctcgaagcagtggaaaccgacccgggc
gaggaacaacgcaagaccgccgacgtcatcgaccttaccgagctgctcaagcgcagcctg
ggcagcaagggcaagcccgccgacaagcccgccgcaaaagcgtctgcaaaagcggcaaag
accagtaaatccgctcccgccaaaaaagccaccaaggcctcccggggctga
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