Paraburkholderia megapolitana: FNZ07_05595
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Entry
FNZ07_05595 CDS
T06515
Name
(GenBank) helix-turn-helix domain-containing protein
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
pmeg
Paraburkholderia megapolitana
Pathway
pmeg03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pmeg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
FNZ07_05595
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pmeg03000
]
FNZ07_05595
03400 DNA repair and recombination proteins [BR:
pmeg03400
]
FNZ07_05595
Enzymes [BR:
pmeg01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
FNZ07_05595
Transcription factors [BR:
pmeg03000
]
Prokaryotic type
Helix-turn-helix
AraC family
FNZ07_05595
DNA repair and recombination proteins [BR:
pmeg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
FNZ07_05595
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HTH_AraC
Motif
Other DBs
NCBI-ProteinID:
QDQ80685
LinkDB
All DBs
Position
1:1307917..1309353
Genome browser
AA seq
478 aa
AA seq
DB search
MTFDRDSCYEAVLARDRRFDGWFFVAVTSTGIYCRPVCPVRSPKLANCRFYANAAAAEQA
GFRPCLRCRPELAPGHGLLDVSRRLAQAAAALIGAGFLNDANLSALAARVGVSTRHLRRI
FEAEFGVSPIDYAQTQRLLMAKRLLADTTLPAAQVALTAGFGSVRRFNDLFSRRYGFTPA
RVRKHATDAARAATADTLTLDLPYRPPFAWDALLYSLTSQAISGVERVTHDSYTRAIAVP
HDGTRVTGWLRADHLPQRLALRITLSSSLTPVVPSLLAQVRRFFDLDCRPDLIDARLGAL
AAALPGMRVPGAFDGFETAVRAIALRHWPRADAHAWLQRIADAFGTPVAQAPDGLRTAFP
SAHALASVSAQTLRATGLPLRGVTCLLKLADEVVQQRVFLEPFTPLDETLAHLRDVIGLD
EWSVQYVAMRALGWPNAYPLGDPLIAQMAPDDGACWAPWRAYAAQHFAYAAGQEASAA
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atgactttcgatcgcgattcctgttatgaagccgtgctggcgcgcgaccggcgcttcgac
ggctggttcttcgtggcggtgacatcgacgggtatttactgccggccggtttgtccggtg
cgttcgccgaagctcgcgaattgccgtttctatgcgaacgccgctgcggcggaacaggcc
ggtttccggccctgcttgcgctgtcgcccggaactcgcgcccggccacgggctgctcgat
gtttcgcgtcggctggcccaggccgcggccgcgctgatcggcgcgggttttctcaacgat
gcgaatctttccgcgctagcggcacgtgtcggcgtcagcacgcggcatttgcggcgcatc
ttcgaagcggaattcggtgtgtcgccgatcgactacgcacaaacgcagcgtctgttgatg
gccaagcgtctgctggcggacacgaccttgcctgctgcgcaggtcgccttgacggcgggg
tttggcagcgtgcggcgctttaacgatctgtttagccgtcgctacggtttcaccccggct
cgcgtgcgcaaacatgccaccgacgccgcgcgcgccgccactgccgatacgctcacgctc
gacttgccgtaccggccgccgtttgcgtgggacgcgctcctgtattccctcaccagtcag
gcgattagcggtgtcgagcgcgtgacgcacgacagctatacgcgtgcgatcgcggtgccg
cacgacgggacgcgcgtaaccggctggctgcgcgcggaccatctgccgcagcggctcgcg
ctgcgcattacgctgtcgtcgtcgctgacgccggtcgtgccgtcgctgcttgcgcaggtg
cggcgattcttcgatctcgattgccggccggatctgatcgatgcgcgcctcggtgcattg
gccgcggcgctgcccggcatgcgcgtgccgggtgccttcgacggtttcgaaaccgctgtg
cgcgcgattgcgctgcgccactggccgcgcgccgacgcacatgcctggctgcaacgtatc
gcggatgcgttcggcacaccggttgcgcaggcgcccgatggattgcgcacggcgtttccg
tcggcgcatgcgttggccagtgtgtcggcgcagacgctgcgtgcgacgggtttgccgttg
cgcggtgtgacgtgtctcttgaagctagccgacgaggtcgtacagcaacgcgtgtttctc
gaaccttttacgccactcgacgaaacgctcgcgcatttgcgcgacgtgatcggtctcgac
gaatggtcggttcaatatgtggcgatgcgcgcgctcggttggcctaacgcctatccgctc
ggcgatccgttgatcgcacagatggcacccgacgacggcgcatgctgggcgccgtggcgc
gcctatgcggctcaacattttgcgtatgcagcgggacaggaggcgagcgccgcatga
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