Paracoccus methylovorus: JWJ88_09285
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Entry
JWJ88_09285 CDS
T08684
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
pmeh
Paracoccus methylovorus
Pathway
pmeh03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pmeh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
JWJ88_09285
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pmeh03400
]
JWJ88_09285
Enzymes [BR:
pmeh01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
JWJ88_09285
DNA repair and recombination proteins [BR:
pmeh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
JWJ88_09285
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-ProteinID:
QRZ12797
LinkDB
All DBs
Position
1:complement(1861827..1862612)
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AA seq
261 aa
AA seq
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MFTIATWNINSVRLREALVARLLTEEAPDILCLQETKSPVEHIPLEAFRALGYNYFVARG
QKGYNGVAILSKLPIEDAGDRDYAGLGHARHVAARLENGVTVHNFYVPAGGDIPDREQNL
KFGQKLDFLTEMRDVFHADRPARAIMVGDLNIAPREDDVWNHKALLKIVSHTPVEVEHLA
AAQDAGKWVDVTRKDIPQGMLYSWWSYRARDWDAADKGRRLDHIWATPDIANAGHGSRIL
RPVRGWQQPSDHVPVLANFDL
NT seq
786 nt
NT seq
+upstream
nt +downstream
nt
gtgttcaccatcgctacctggaacataaactcggttcgcctgcgcgaggcgcttgtcgcc
cgtctcctgaccgaagaagccccggatatcctctgcctgcaggaaacgaaaagtccggtc
gagcatattccgctcgaggcgttccgggcgcttggctacaactatttcgtggcgcgcggg
caaaagggctacaacggcgtggccatcctgtccaaactgccgatcgaggatgcgggcgat
cgcgattatgccgggctgggtcatgcccgccatgttgccgcgcggctggagaacggcgtt
accgtccataacttttacgttccggcgggtggcgatattcctgatcgtgaacagaacctc
aagttcggccagaagctcgatttcctgaccgagatgcgcgacgtctttcatgccgacagg
cccgcgcgcgcgatcatggtgggcgatctcaacatcgccccgcgcgaggatgacgtctgg
aaccacaaggcgttactgaagatcgtcagccacaccccagtcgaggtcgaacatctggct
gcggcgcaggatgccgggaaatgggtcgatgtcacccgcaaggatattccccaaggcatg
ctctacagttggtggagctatcgcgcacgcgactgggatgccgccgacaagggccgacgt
ctcgatcatatctgggccacgccggatattgccaatgcgggccatggcagccgcatcctg
cgccctgtgcgcggctggcagcagcccagcgaccacgttccggtgctggccaactttgat
ctttga
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