Parabacteroides merdae: INE87_02275
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Entry
INE87_02275 CDS
T07751
Name
(GenBank) RNA pseudouridylate synthase
KO
K06180
23S rRNA pseudouridine1911/1915/1917 synthase [EC:
5.4.99.23
]
Organism
pmer
Parabacteroides merdae
Brite
KEGG Orthology (KO) [BR:
pmer00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pmer03009
]
INE87_02275
Enzymes [BR:
pmer01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.23 23S rRNA pseudouridine1911/1915/1917 synthase
INE87_02275
Ribosome biogenesis [BR:
pmer03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
INE87_02275
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
QUT49793
LinkDB
All DBs
Position
complement(2698473..2699552)
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AA seq
359 aa
AA seq
DB search
MDEFLDEMDDEQVDDLLQPEEGEDKAPQLYEHFRFVADRGQSLLRVDKFLVDRMFGATRN
RIQSAADAGCIMANGKPVKSNYRVKPEDVVTIMMTRPPRTFEILPENIPIKIVYEDDDLL
VVDKPAGLVVHPGHGNYTGTLVNALAWYLKDDPTYDPNDPALGLVHRIDKDTSGLLVVAK
KPEAKAHLSMQFFHKTTKREYRALVWGIVREDEGRIEGNIGRNPRDRMQMTVFPEGDQGK
TAVTHYSVLERLGYVTLVKCRLETGRTHQIRVHMKYIGHTLFNDERYGGNEILKGTTSSK
YKQFVDNCFAICPRQALHAKTLGFVHPTTGEEMFFDSEIPADMTALIDKWRVYANTKEL
NT seq
1080 nt
NT seq
+upstream
nt +downstream
nt
atggatgagtttttagacgaaatggatgatgaacaggtagacgacctgttacaaccggaa
gagggtgaagataaggctcctcaactgtatgaacacttccgcttcgtggccgatcgcggg
cagtcgttgttgcgtgtggataaattcctggtagaccggatgttcggtgctacgcgtaac
aggatacagtcggctgccgatgccggttgtatcatggcaaacggcaaaccggtgaaaagc
aattaccgggtgaaaccggaggatgttgtgacaattatgatgacacgacctccgcggact
ttcgagattctccctgaaaatatccctataaagatcgtgtacgaagatgacgatctgctg
gtggtcgacaaaccggcagggttggtcgtacatcccggacacggaaactataccggaacg
ctggtgaatgcccttgcttggtatttgaaagacgatcctacctacgatcccaatgatcct
gccctgggactcgtccatcgtatcgataaagatacatccggcctgctggttgtcgccaaa
aagccggaagcgaaagcacacctcagtatgcaattcttccataagacaaccaagcgggaa
tatcgggccttggtgtgggggatcgtgcgtgaagacgaaggacggatagaaggcaatata
ggccgtaacccgcgtgaccgtatgcagatgacggttttcccagaaggcgaccagggaaag
acggcggtcacccactattctgttttggaacgtctaggctacgtcacgctggtgaaatgc
cgtctcgaaaccggacgtacgcatcagatacgtgtccacatgaaatatatcgggcatacg
ctattcaacgacgaacgttatggcggaaacgagatcctgaaaggaacaacctcttctaaa
tataaacagtttgtcgataactgtttcgccatttgcccgcggcaggcactccatgccaag
acgctgggttttgttcatccgactacaggcgaggaaatgttttttgattccgaaatacct
gccgacatgactgcgttgatcgataaatggcgcgtatatgcaaatactaaagaattatag
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