Prochlorococcus marinus MIT 9312: PMT9312_0135
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Entry
PMT9312_0135 CDS
T00297
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
pmi
Prochlorococcus marinus MIT 9312
Brite
KEGG Orthology (KO) [BR:
pmi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pmi03400
]
PMT9312_0135
DNA repair and recombination proteins [BR:
pmi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
PMT9312_0135
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Rubredoxin_2
DnaB_C
ChlI
Lon_C
GvpD_P-loop
Rad51
AAA_5
AAA
AAA_22
AAA_14
nSTAND3
AAA_16
DAP3
AAA_24
NTPase_1
Motif
Other DBs
NCBI-ProteinID:
ABB49197
UniProt:
Q31D48
LinkDB
All DBs
Position
complement(131196..132545)
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AA seq
449 aa
AA seq
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MSSKLSTFICQNCGTETSQYFGKCLNCNSWNSIVEEIKSKRSKHQGVNNSQKAIPFNEIS
SKKISRFTSGFNEFDRVLGGGIVPGSVVLLGGEPGIGKSTIVLQSAGKISLNEKVLYVTA
EESLEQVKIRWERLNQNSIDLKIFAETNLSLIIKEIKRVNPSFAIIDSIQAIHNHEMESS
PGSVSQVRECSSELQNLAKQNNIALLIIGHVTKDGTLAGPKTLEHLVDAVINFEGDNISS
HRLLRSIKNRFGSTFEIGIFEMLEKGLREVKNPSSIFTNKENIAGVTTTITKEGTRPFAV
DIQALVNKTFYSNPRRTTTGISINRLHQILAVIEKHVGIKLSEFDCYVATGGGFEINDPS
SDLGVAISILSSLKNIPPLANSSFIGELGLSGQVRKSNNLRTKIEEAARLGIKNIVVPKL
EEDLNNFQNLINIKEISNIKEAVEYSLSE
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgtctagcaaattgtcaacttttatttgtcaaaattgcggaactgaaacttctcaatac
tttgggaaatgccttaattgcaactcatggaattccattgttgaagaaattaaaagcaag
agatctaagcatcaaggtgtaaataatagtcaaaaagctataccatttaatgaaatttca
tctaaaaaaatatcaagatttacaagtggttttaatgagtttgatcgagttcttggaggc
gggatagtccctggatctgttgtgttacttggaggagagccagggataggtaaaagcaca
atagttcttcaatcagcaggaaaaatatctctcaacgagaaagttttatacgtaactgcc
gaggaatctttagaacaagtaaaaatcagatgggaaagattaaatcaaaatagtatagat
ttaaaaatttttgcagaaaccaatttatctctaataattaaagagataaaacgtgtaaat
ccaagtttcgcaattatcgatagtattcaagccatccataatcatgagatggaaagttcg
ccaggatcagtttctcaagttagagaatgttcatctgaattacagaatctcgctaaacaa
aataatattgcacttctaataattggtcatgtcaccaaagatgggactttagctggtcca
aaaactctagagcatttagttgatgcagtaataaactttgaaggagataatatttcctct
catagattactaagaagtataaaaaatcgatttggatctacctttgaaattggaattttt
gaaatgcttgaaaaaggcttacgggaggtaaaaaacccaagttcaatctttacaaataaa
gagaatattgcaggtgtgacaaccacgattacaaaagaaggtactagaccatttgcagtt
gatatacaagcactggtaaataaaactttctacagtaacccaagacgaaccacaactgga
attagcattaacagattacatcaaattctagctgttattgaaaaacacgtcggcattaaa
ttatctgaatttgattgttatgtagctactgggggtggttttgaaattaatgatccttca
tctgacttaggtgtagccatatcaattttatcaagtttaaaaaatattcctcctttggcc
aatagctcatttattggagaattgggtttgagcggtcaagttagaaaatcgaataacctt
cgaacaaagatagaagaggctgcaagactaggaatcaaaaatatcgtagtgccaaaatta
gaggaggatctaaataattttcaaaatttaatcaatatcaaagagatttcgaatattaaa
gaagcagttgaatattctttatcagagtaa
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