Proteus mirabilis BB2000: BB2000_3372
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Entry
BB2000_3372 CDS
T02789
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
pmib
Proteus mirabilis BB2000
Pathway
pmib00300
Lysine biosynthesis
pmib00470
D-Amino acid metabolism
pmib01100
Metabolic pathways
pmib01110
Biosynthesis of secondary metabolites
pmib01120
Microbial metabolism in diverse environments
pmib01230
Biosynthesis of amino acids
Module
pmib_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
pmib00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
BB2000_3372 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
BB2000_3372 (dapF)
Enzymes [BR:
pmib01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
BB2000_3372 (dapF)
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GFIT
Motif
Pfam:
DAP_epimerase
PhzC-PhzF
Motif
Other DBs
NCBI-ProteinID:
AGS61795
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Position
3655074..3655898
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AA seq
274 aa
AA seq
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MQFSKMHGLGNDFMVVDAVTQNVYFSPELICRLANRHTGVGFDQLLVVEAPYDPELDFHY
RIFNADGSEVAQCGNGARCFARFVRLKGLTNKREIKVSTQSGRMTLHVMDNEDVCVNMGE
PEFEPQKVPFRAQKVEKTYIIRAMERTVLCGVVSMGNPHCVIQVEDIKTAEVESLGSVLE
QHERFPERANIGFMQVVDRNTLHLRVFERGAGETQACGSGACAAVAVGISQGLLDRKVKV
NLPGGSLSIEWKGTGNPLYMTGPAVHIYDGTIQL
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atgcaattttcaaaaatgcatgggttaggcaatgactttatggttgttgatgctgttacc
caaaatgtttatttttcaccagaattaatttgccggttagccaatcgacatactggtgtt
gggtttgatcaactgttagtagttgaagcaccttatgatcctgaattggactttcattac
cgcatttttaatgctgatgggagtgaagtcgcacaatgtggcaatggtgctcgctgtttt
gctcgatttgtgagactaaaagggcttacaaataaaagagaaataaaagtcagtacccag
tctggcagaatgaccttacatgttatggataatgaagatgtttgtgtcaatatgggagag
ccagagtttgaaccacaaaaagtaccgtttcgtgctcaaaaagtagaaaaaacctatatt
atcagagcgatggaacgaacagttctatgtggtgtggtgtcaatgggaaatccgcactgc
gtgatccaagtggaagatatcaaaactgcggaagttgagtcattgggctcagtattggaa
caacacgaacgctttccagagcgcgccaatattggttttatgcaggtggttgatagaaat
acattgcatttacgggtatttgaacgtggtgctggagaaactcaagcttgtggaagtggt
gcctgtgccgctgtcgcggtggggatctcccaaggtttattagatagaaaagtgaaagtt
aatttaccgggtggatcattatcaattgaatggaaaggtacaggaaacccactttatatg
acaggacctgctgtgcatatttatgatggaacaatccagctataa
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