Parvimonas micra: NW74_04380
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Entry
NW74_04380 CDS
T03515
Name
(GenBank) DNA polymerase III subunit alpha
KO
K03763
DNA polymerase III subunit alpha, Gram-positive type [EC:
2.7.7.7
]
Organism
pmic
Parvimonas micra
Pathway
pmic03030
DNA replication
pmic03430
Mismatch repair
pmic03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pmic00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NW74_04380
03430 Mismatch repair
NW74_04380
03440 Homologous recombination
NW74_04380
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pmic03032
]
NW74_04380
03400 DNA repair and recombination proteins [BR:
pmic03400
]
NW74_04380
Enzymes [BR:
pmic01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NW74_04380
DNA replication proteins [BR:
pmic03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
NW74_04380
DNA repair and recombination proteins [BR:
pmic03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
NW74_04380
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
RNase_T
DNA_pol3_finger
PHP
RNase_H_2
HHH_6
tRNA_anti-codon
DEDDh_C
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
AIZ36621
UniProt:
A0A0B4S232
LinkDB
All DBs
Position
complement(933107..937402)
Genome browser
AA seq
1431 aa
AA seq
DB search
MYRSLKSFYFSQRKNYSLSDDFIIDEFIFGDEKISFRLLTNSDDIGIEELIVLDKELHEI
FNGREVDFSVQNFSKSEYPYKYFYYINYDEFVNEVQKLLKNHGFSLTNSDRINFLEDYIE
IFISNSLCRFKLISNSFLDDLKEFISGKFTEDIELIMLNCLITREEKSCEKLDNKLENKR
KEIKQENKIKAEKVKVNKESTEENSLFILGKKISDKDPILKISDLDQNSGFCKIQGRVYD
LEIRELKSGKKLALFDIEDETSAMNCKWFLDEKKLSIFNNNINKDSIKKGIYVTAIGRVE
YDQYAKGISMMIDGMEKSSSFVYIDNAPEKRVELHLNSQMSGLDGCVNLEVLKSRLEEMG
HTAVGVTDIGVVQAYPKMMDLFGKSDIKALYGLELNLLEDNPRILYNYKDGVNFDTFVVF
DIETTGLSHLKNNITEIGAVRVESGKIVDVFNELVNPEQEISQEITEITGITNEMVADKP
LISEIMPKFLEFSKNAVFVAHNAEFDISFIKTNCKRLNLEFNPTFIDTMGFARAILPHLK
NHKLNTLCKELGVNLLNHHRASFDAEACAGILLELIKIVEKEGKVFDENINNIETKWPVA
KNISYNSIIYVKKMEALSGFYKMVSEGLMKYFRRVAGFPKSRLKEYREGLLIGSGNWDGE
LFRAFIEEKSEEEILEIAKFYDFFEIQPISNLKHLFFRGKVLSIDDLKEINKKIYELGKK
LDKLVVATGNVKYLDKNDYIFRNVILYGQGRKNLEKEGSFYFRTTDEMFDEFSYLGKDEA
YEVVVKNTNIFKDMLEDILPIPNGTYPPFIEGSDEELRKICYDKAKSIYGENLPKIVEDR
LERELSSIIKNGYAVLYIIAQKLVWRSNDDGYLVGSRGSVGSSFAATMAGITEVNPLIPH
YICPKCKYSEFHEEYSGQSGVDMPDKECPHCKINMSKEGHDIPFEVFLGFDGDKEPDIDL
NFAGEYQSTCHKYTEELFGSDKVYRAGTIGTISDKTAFGYVKKFVEEKEISLTAGNIRRY
VRKIVGVKRTSGQHPGGVMIVPHNKEIYDFTPIQYPADDPTSETKTTHFSYKSISGRILK
LDLLGHDVPTIIKHLGDLTGVDPLNIPMDDKETLNIFYSTDSLKLIDNKYKDSVGTLGIP
EYGTNFVRQMLLDTRPKTLTELIRISGLSHGTDVWLGNAQELIKKGIPLNETICTRDDIM
TFLIFKGLENKSSFKIMETVRKGKSLDEETESYMRENGIPEWYIESCKKIKYLFPKAHAV
AYVMMSYRIAYFKVHYPEAFYATYFTTKIDNYPGNLIFKGLTAIQTKMKEIEELGKLASQ
KEQDVYDILEVAEEMYLRGIVASKVDLERSDSSRFLIDGNGKILPPFRALDFVSDVNSVS
IYEEVRKLPFISIEDFQERTKINKNALESLREHGVLNKLQETNQVSLFDLL
NT seq
4296 nt
NT seq
+upstream
nt +downstream
nt
atgtataggagtttaaaaagtttttatttttcacagcgaaaaaattacagcttatcagat
gattttatcattgatgagtttatttttggtgatgaaaagataagttttagattgcttaca
aactccgatgatattggaatagaagaacttattgttttggataaagaacttcatgagata
tttaatggaagagaagtagatttttcggttcaaaacttttcaaaatctgaatatccttat
aaatatttttattatataaattatgatgaatttgtgaatgaagttcaaaaattattgaag
aatcatggattttcacttactaatagtgatagaataaattttttggaagattatatagaa
atttttatttcaaattctctttgtaggtttaaacttatttcaaattcttttttggatgat
ttaaaagaatttatatccggtaaatttactgaagacattgagcttattatgctaaattgt
ttaataacaagagaagaaaaaagttgtgaaaaacttgataacaaattagaaaataaaaga
aaagaaataaagcaagaaaataaaattaaagctgaaaaagttaaagtaaataaagaaagt
acagaagaaaatagtttatttatactaggtaaaaagatttcggataaagatccaatttta
aaaatttcagatttagatcaaaatagtggtttttgtaaaattcagggaagagtttatgat
ttagaaattagagagctgaaaagtgggaaaaaattagcattatttgatattgaagatgaa
acttctgctatgaattgtaaatggtttttagatgaaaagaaattatctattttcaataat
aatataaataaagactccattaaaaaaggaatttatgtaacggctatcggtagagttgaa
tatgatcaatatgcaaaaggaatttctatgatgattgatggtatggaaaagtcttcaagt
tttgtttatattgataatgcacctgaaaagagagttgaactgcatttgaattcacaaatg
agtgggcttgatggttgtgtaaatttagaagtcttaaaatcaagattggaagaaatgggt
catactgccgtaggtgtcacagatattggagttgttcaagcatatccgaaaatgatggat
ttgtttgggaagagcgatataaaggcattatatggacttgaattaaatttgttagaggat
aacccgagaattttatataattataaagatggtgtaaattttgatacttttgtagttttt
gatattgagacaactggtctttcacatttaaaaaataatattacagaaataggagctgtt
cgagttgaaagtggaaaaatagttgatgtttttaatgagctggtaaatcctgaacaagaa
atatctcaagaaattactgaaataaccggtattactaatgaaatggtagcagataaacca
ttaataagtgaaattatgccaaagtttttagaattttctaaaaatgcagtttttgttgca
cataatgcagaatttgatatttcatttataaaaactaactgtaagagattaaatcttgaa
tttaatccaacatttatagatacaatgggttttgcaagagctatattaccacatttaaaa
aatcataaacttaatacattatgtaaggaattaggagtaaatttattaaatcatcataga
gccagttttgatgctgaggcttgtgcaggaatacttttagaacttataaaaatagttgaa
aaagaaggaaaagtatttgatgaaaatataaataatattgaaacaaaatggcctgttgca
aaaaacatttcatataattcaattatatatgttaagaaaatggaagccttaagtggattt
tataagatggtttctgaaggattaatgaagtattttagaagagttgccggctttccaaag
tcaagattgaaggaatatagagaaggccttttaatcggttcgggaaattgggatggagaa
ctttttagagcttttattgaagaaaaaagtgaagaagaaattttagaaattgcaaaattt
tatgatttttttgagattcaacctatatctaatttaaaacatttgttttttagaggtaaa
gttttaagcatagatgatttgaaagaaataaataaaaagatttatgaactcggaaagaaa
ttagataagttagtggtagcaactggaaatgtaaaatacttggataaaaatgattatatt
tttagaaatgtaattttatatggtcaaggaagaaaaaatcttgaaaaagaaggttcattt
tattttagaactactgatgaaatgtttgatgagttttcatatcttgggaaagatgaagcc
tatgaagttgtagtaaaaaatacaaatatatttaaagatatgctggaagatattttacct
attcctaatggaacatatccaccttttattgaaggttctgatgaagaattaagaaaaata
tgttatgataaggctaaatctatttatggagaaaatttaccaaaaatagttgaagatagg
cttgagagagaattaagttcaattataaaaaatggatacgctgtattatatataattgct
caaaaattggtttggagatcaaatgatgatggatatttggtaggttcaagaggatctgtc
ggctcatcttttgcagctactatggctggcataacggaagtaaatccattaatcccacat
tatatttgtccaaaatgcaaatattcagaatttcatgaagaatatagtgggcaatccgga
gtcgatatgcctgataaagaatgtccacattgtaaaataaatatgagtaaggaagggcat
gacattccttttgaagtatttttaggatttgatggtgataaagaaccggatattgattta
aattttgccggagaatatcaatcaacttgtcataaatatactgaagaactatttgggtcg
gataaagtttatagagccggaacaattggtacaatttctgataaaactgcatttggttat
gttaaaaaatttgtagaagaaaaagaaatttctttaactgccggtaatattagaaggtat
gtaagaaagatagttggcgtaaaaagaacaagcggtcaacatcccggtggtgtaatgatt
gttcctcataataaagaaatctatgattttactccgatacaatatccggcagatgatcca
acgtctgaaactaaaacaacacattttagttataagtctataagtggaagaattttaaaa
cttgatttacttggacacgatgttccaactataataaaacatttaggagatttaacagga
gttgatcctctaaatattcctatggatgacaaggaaactttaaatatattttattcaaca
gatagcttaaaactaatagataataaatacaaagattcagtaggtactttaggaatacct
gaatatggaacgaattttgtaagacagatgctacttgatacaagaccaaaaactttaact
gaacttataagaatttcaggtctatctcatggaactgatgtatggcttggaaatgcacaa
gaacttataaaaaaaggaattcctttaaatgagacgatttgtactagagatgatataatg
acatttttgatttttaaaggtcttgaaaataaaagttcatttaaaataatggaaacagtc
agaaaagggaaaagtcttgatgaagaaacagaatcatatatgagagaaaacggaatacct
gaatggtatattgaatcatgtaaaaagataaaatacctttttccaaaagctcatgctgtt
gcttatgtaatgatgagttatagaattgcatattttaaagttcattatccggaagcattt
tatgcaacatattttacaacaaaaatagataattatccaggtaatttaatttttaaagga
cttactgcaatccaaactaaaatgaaggaaatagaagaattaggaaaattagcatcacaa
aaagaacaggatgtatatgatattcttgaagttgcggaagaaatgtatcttagaggaatt
gttgcaagcaaagttgatttagaaaggtcagattcttcaagatttttaattgatggaaat
ggaaaaatcctacctccatttagagcgttagattttgtaagcgatgtaaattcagtttca
atttatgaagaagttagaaaattaccatttatctctattgaagattttcaagagagaaca
aaaataaataaaaatgctttagaatccttaagagaacatggggtgttaaataagttgcaa
gaaacgaatcaagttagtttgtttgatttattgtaa
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