Pseudomonas monsensis: HV782_000420
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Entry
HV782_000420 CDS
T07539
Symbol
tssC
Name
(GenBank) type VI secretion system contractile sheath large subunit
KO
K11900
type VI secretion system protein ImpC
Organism
pmoe
Pseudomonas monsensis
Pathway
pmoe02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
pmoe00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
HV782_000420 (tssC)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pmoe02044
]
HV782_000420 (tssC)
Secretion system [BR:
pmoe02044
]
Type VI secretion system
Imp/Vas secretion system core components
HV782_000420 (tssC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VipB
VipB_2
Motif
Other DBs
NCBI-ProteinID:
QXI00493
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All DBs
Position
complement(89113..90588)
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AA seq
491 aa
AA seq
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MSTSAAQEKSADNGEYSILDSIIAETRLTPDDEAYDIAKRGVSAFIEELLKPQNNGEPVK
KAMVDRMIAEIDAKLSRQMDEILHHPDFQALESSWRGLQLLVDRTNFRENIKIEILNVSK
EDLLDDFEDSPEVMQSGLYKHIYTAEYGQFGGQPVGAIIANYFMSPSSPDVKLMQYVASV
SCMSHAPFIAAAGPKFFGLESFTGLPDLKDLKDHFEGPQFAKWQSFRTSEDSRYVGLTVP
RFLLRNPYDPEENPVKSFVYKETVANSHEHYLWGNTAFAFGTKLTDSFAKFRWCPNIIGP
QSGGAVEDLPLHHFESMGEIETKIPTEVLVSDRREYELAEEGFISLTMRKGSDNAAFFSA
SSVQKPKFFGISAEGKAAELNYKLGTQLPYMMIVNRLAHYLKVLQREQLGSWKERTDLEL
ELNKWIRQYVADQENPSAEVRGRRPLRAAQVIVSDVEGEPGWYRVSLNVRPHFKYMGADF
TLSLVGKLDKE
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgagcactagcgcagcacaagagaaaagcgccgacaacggcgagtacagcattctcgac
agcatcatcgccgaaacccgtctgaccccggacgacgaagcctacgacatcgccaagcgt
ggcgtgtcggcgttcatcgaagagctgctcaagccgcagaacaacggtgagccggtcaag
aaagccatggttgaccgcatgatcgccgagatcgacgccaagctcagccgtcagatggac
gaaatcctccaccacccggatttccaggccctggaatcgtcgtggcgtggtctgcagttg
ctggtcgaccgcaccaacttccgcgaaaacatcaagatcgaaatcctcaacgtctccaaa
gaagacctgctggacgatttcgaagattcgccggaagtcatgcagtcgggcctgtacaag
cacatctacaccgctgaatacggccagttcggtggtcagccggttggcgcgatcatcgcc
aactacttcatgtccccaagctcgccggacgtgaaactgatgcaatacgtggccagcgta
tcctgcatgtcccacgcgccgttcatcgccgcggccggtccgaaattcttcggtctggaa
agcttcaccggcctgccggatctgaaagatctgaaagaccacttcgaaggcccgcaattc
gccaaatggcagagcttccgtacttcggaagactcccgttacgttggcctgaccgtgccg
cgtttcctgctgcgtaacccgtacgatccggaagaaaacccggtcaaatcgttcgtgtac
aaggaaaccgttgccaacagccacgagcactacctgtggggcaacaccgctttcgcgttc
ggcaccaagctgaccgacagcttcgccaaattccgctggtgcccgaacatcatcggccca
cagagcggtggcgcggttgaagacctgccgttgcaccatttcgaaagcatgggcgaaatc
gaaaccaagatccctaccgaggttctggtttccgaccgtcgtgaatacgaactggccgag
gaaggcttcatctccctgaccatgcgcaaaggctccgacaacgcggcgttcttctccgca
agctcggtgcagaagccgaagttcttcggcatcagcgcagaaggcaaggcggcagagctg
aactacaagctcggcacccaactgccgtacatgatgatcgtcaaccgcctggctcactac
ctgaaagtgctgcagcgcgagcaactcggttcgtggaaagaacgtaccgacctcgagctg
gaactgaacaagtggattcgccagtacgtcgccgaccaggaaaacccgagcgccgaagtg
cgtggccgtcgtccgctgcgcgctgcgcaagtgatcgtcagcgacgttgaaggcgagccg
ggctggtaccgcgtgagcttgaacgtgcgtccgcacttcaagtacatgggtgccgatttc
accctgtcgctggttggcaagctggacaaagagtaa
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