Pseudomonas mosselii: CLJ08_21655
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Entry
CLJ08_21655 CDS
T07806
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
pmol
Pseudomonas mosselii
Brite
KEGG Orthology (KO) [BR:
pmol00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pmol03032
]
CLJ08_21655
03400 DNA repair and recombination proteins [BR:
pmol03400
]
CLJ08_21655
Enzymes [BR:
pmol01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
CLJ08_21655
DNA replication proteins [BR:
pmol03032
]
Prokaryotic type
DNA Topoisomerases
CLJ08_21655
DNA repair and recombination proteins [BR:
pmol03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
CLJ08_21655
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Topo_Zn_Ribbon
TOP1_ZnF
Toprim
zf-C4_Topoisom
Zn_ribbon_recom
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
ATB67089
LinkDB
All DBs
Position
4697321..4699930
Genome browser
AA seq
869 aa
AA seq
DB search
MGKSLVIVESPAKAKTINKYLGSQYVVKSSIGHIRDLPTSGSASASKEPAAKRGKTAAEA
PALSPKEKARRTLVARMGVDPEAGWKAKYEILPGKEKVIEELRRLAKDADTIYLATDLDR
EGEAIAWHLREAIGGDDSRYKRVVFNEITKKAIQEAFSQPGELDIDRVNAQQARRFLDRV
VGYMVSPLLWAKIARGLSAGRVQSVAVKLVVEREREIRAFNPEEYWEVHADLGTAKNAKV
RFEVAREKGEAFKPLNEAQAMAALEKLKASSYSVSKREDRPTSSKPSAPFITSTLQQAAS
NRLGFGVKKTMMMAQRLYEAGYITYMRTDSTNLSTDAVEMARSYIEKEFGKQYLPAAPIV
YGSKEGAQEAHEAIRPSDVNTHPTKLSGMERDAERLYELIWRQFLACQMPPAQYLSTSVT
VVAGEFELRAKGRILKFDGYTRVLPQQSKPGEDDVLPEMAQGEALKLIQLDPSQHFTKPP
ARFTEASLVKEMEKRGIGRPSTYAAIISTIQDRGYVTLHNRRFYSEKMGDIVTERLSESF
ANLMDYGFTAGMEENLDDVAQGERDWKNVLDEFYGDFSKKLQTAESTEHGMRANQPTLTN
IACKECGRPMMIRTASTGVFLGCSGYSLPPKERCKATVNLVPGDEIAADDEGESESLVLR
GKHRCPICSTAMDAYLLDEKRKLHICGNNPDCAGYEIEEGSYRIKGYEGPSLECDKCGSE
MQLKTGRFGKFFGCTNPTCKNTRKLLKSGEAAPPKMDKVDMPELKCEKVDDTYVLRDGAS
GLFLAASQFPKNRETRAPLVLEIVPHKHEIDPKYHFLCEAPQKDPDGRPAVIRYSRKTKE
QYVQSEVDGKPTGWKAFYDGKAWKVEDKR
NT seq
2610 nt
NT seq
+upstream
nt +downstream
nt
atgggcaaatcgctggtcattgtggaatccccggccaaggccaagaccatcaacaagtac
ctgggcagccagtacgtggtgaagtcgagtatcggccacatccgtgaccttcccaccagc
ggttccgccagtgcgagcaaggaaccggcggccaagcgcggcaagaccgcggccgaggcc
ccggccttgtcgccgaaggagaaggcgcgccgcaccctggtcgcgcgcatgggcgtcgac
ccggaagcgggctggaaggccaagtacgagatccttcccggcaaggagaaggtgatcgag
gagctgcgccgcctggccaaggatgccgacaccatctatctcgcaaccgacttggatcgc
gagggggaagccattgcctggcacctgcgcgaagccatcggcggcgacgacagccgctac
aagcgcgtggtgttcaacgagatcaccaaaaaggctatccaggaagccttctcccagccg
ggcgagctcgatatcgaccgggtcaacgcccagcaggcgcggcgcttcctcgaccgcgtg
gtcggctacatggtctcgccgctgctgtgggccaagatcgcccgcggcctctccgcaggt
cgtgtgcagtcggtggcggtaaagttggtggtcgagcgtgagcgcgagatccgcgcgttc
aatccggaagagtactgggaagtccacgccgacctgggcaccgccaagaacgccaaggtg
cgtttcgaggtggctcgcgagaagggcgaggccttcaagccgctcaacgaagcccaggcc
atggccgcgctggagaagctcaaggcctccagctacagcgtgagcaagcgcgaggaccgg
ccgaccagcagcaagccttcggcgccgttcatcacctccaccctgcagcaggccgcgagc
aaccgcctgggcttcggggtgaagaagaccatgatgatggcccagcgtctgtacgaagcc
ggctacatcacctacatgcgtaccgactcgaccaacctgtcgaccgacgcggtcgagatg
gcgcgcagctacatcgagaaagaattcggcaagcagtacctgcccgccgcgccgatcgtc
tacggaagcaaggaaggcgcccaggaggcgcacgaggcgattcgtccgtcggatgtaaac
acccatccgaccaagctcagcggcatggaacgtgatgccgagcgcctgtacgagctgatc
tggcgccagttcctggcctgccagatgccgccggcgcaatacctgtccaccagcgtcacc
gtggtggccggcgagttcgagctgcgtgccaagggccgcatcctcaagttcgacggttac
acccgcgtcctgccgcagcagagcaagccgggcgaggacgacgtgctgccggaaatggcc
cagggcgaggcgctcaagctgatccagctcgatcccagccagcacttcaccaagccaccg
gcgcgcttcaccgaagcgagcctggtcaaggaaatggaaaagcgcggcatcggccggccg
tcgacctacgcggcgatcatctcgactatccaggaccgtggctacgttaccctgcacaac
cgtcggttctactccgagaagatgggcgacatcgtcaccgagcgcctgtccgagagcttc
gccaacctgatggactacggcttcaccgccggcatggaagagaacctcgacgacgtggcc
cagggcgagcgtgactggaagaacgtccttgacgagttctatggcgacttcagcaagaag
ctgcagactgccgagtcaaccgagcacggcatgcgggccaaccagcccaccctgaccaac
atcgcctgcaaggaatgcggccggccgatgatgatccgtaccgcctccaccggcgtgttc
cttggttgctcgggttacagcctgccgccgaaggagcgctgcaaggccacggtcaacctg
gtgccgggcgacgagatcgctgccgacgacgagggcgagtccgagtcgctggtgctgcgc
ggcaagcaccgttgcccgatctgctccactgcgatggacgcctacctgctcgacgagaag
cgcaagctgcacatctgtggcaacaacccggactgcgctggctacgagatcgaggagggc
agctaccgcatcaagggctacgaaggcccgagcctggagtgcgacaagtgcggcagtgag
atgcagctcaagaccggtcgtttcggcaagttcttcggctgcaccaaccccacctgcaag
aacacccgcaagttgctcaagagcggcgaggcagcgccgccgaagatggacaaggtggac
atgccggagctcaagtgcgagaaggtcgacgatacctacgtgctgcgcgacggcgcctcg
gggttgttcctggccgccagccagttcccgaagaaccgcgagacccgtgcgccgctggtg
ttggagatcgttccgcacaagcacgagatcgatccgaagtaccacttcctctgcgaagcg
ccgcagaaggacccggacgggcgcccggcggtgattcgctacagccgcaagaccaaggag
cagtacgtgcagtccgaggtcgacggcaagccgaccggctggaaggcgttctacgacggc
aaggcgtggaaggtcgaagacaagcgctga
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integrated database retrieval system
