Pseudomonas mucidolens: NCTC8068_00087
Help
Entry
NCTC8068_00087 CDS
T08935
Symbol
algB
Name
(GenBank) two component sigma-54 specific Fis family transcriptional regulator
KO
K11384
two-component system, NtrC family, response regulator AlgB
Organism
pmud
Pseudomonas mucidolens
Pathway
pmud02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pmud00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
NCTC8068_00087 (algB)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
pmud02022
]
NCTC8068_00087 (algB)
Two-component system [BR:
pmud02022
]
NtrC family
KinB-AlgB (alginate production)
NCTC8068_00087 (algB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
HTH_8
AAA_5
AAA
cREC_REC
VpsR
Mg_chelatase
AAA_22
AAA_2
AAA_19
MCM
AAA_16
HTH_23
HTH_29
nSTAND3
Xre-like-HTH
IstB_IS21
HTH_50
Motif
Other DBs
NCBI-ProteinID:
SQH31180
LinkDB
All DBs
Position
1:complement(89676..91022)
Genome browser
AA seq
448 aa
AA seq
DB search
MESAKELQGRILLVDDESAILRTFRYCLEDEGYTVATANSAAQADALLQRQVFDLCFLDL
RLGEDNGLDVLAQMRIQAPWMRVVIVTAHSAVDTAVDAIQAGAADYLVKPCSPDQLRLAT
AKQLEVRQLSARLEVLEGAVRQSKDGLDSHSPAMMVVLETARQVASTDANILILGESGTG
KGELARAIHGWSKRAKKSCVTINCPSLTAELMESELFGHSRGAFTGASESTLGRVNQADG
GTLFLDEIGDFPLTLQPKLLRFIQDKEYERVGDPVTRRADVRILAATNLNLEDMVRDGRF
REDLLYRLNVITLHLPPLRERSEDILTLADRFLARFVKEYARPARGFSDEAREALLNYRW
PGNIRELRNVVERASIICAQEKVEISHLGMAEQSTNNSPRIGAALSLDELEKAHIGAVLA
TSDTLDQAARTLGIDASTLYRKRKQYNL
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atggaatcagccaaggaactacaaggccgcattcttttagtcgacgacgaatcggcgatc
cttcgcactttccgctactgcctggaagatgaaggctacaccgtagccactgccaacagt
gccgcccaggctgacgcgctgttgcaacgccaagtgttcgacctgtgcttcctggatctg
cgcctgggcgaagacaacggcctggatgtgctggcacaaatgcgcatccaggcgccgtgg
atgcgcgtggtgattgtcaccgcgcactcggcagtggatacggccgtggacgcgatacag
gccggcgccgccgattacctggtcaagccgtgcagcccggaccagttgcgcctggcgacc
gccaagcaattggaagtgcgccaactctcggcacgtctcgaagtgctcgaaggcgccgtg
cgtcaatccaaggacggccttgattctcacagcccggcaatgatggtggtactggagacg
gcccgccaggtggcaagcaccgatgccaatattctgatcctcggcgagtccggcaccggt
aagggtgaactggcccgagcgattcatggctggagcaaaagggcgaagaaatcctgcgtc
accatcaattgcccgtcactgaccgcagagctgatggaaagcgaactattcggccacagc
cgcggcgccttcactggggccagcgaaagcaccttgggccgcgtcaaccaagcggatggc
ggtacgctgtttctcgacgaaatcggcgatttccctctgaccctgcaacccaagttgctg
cgttttattcaggacaaggaatatgaacgagtcggtgatccggtcacgcgccgcgccgat
gtacgcatcctggcagccaccaacctgaatctggaagacatggtccgcgacggacgcttt
cgcgaagacttgctgtatcgcctcaatgtcatcaccttgcacttgccgcctttgcgcgag
cgcagcgaagacattctcacgctggccgaccgcttcctggcgcgcttcgtcaaagagtat
gcgcggccggcgcgaggcttcagcgatgaggcacgagaggcgctgctcaactatcggtgg
ccgggtaatatccgcgagctgcgcaatgtggtggagcgcgccagcatcatctgcgctcag
gaaaaggtcgaaatcagccacttggggatggccgagcaatccaccaacaactcaccacgc
atcggggcggccttaagcctggatgagctggagaaagcgcatatcggcgcggttctcgcc
accagcgacacccttgatcaggcggccagaaccctcggcattgacgcgtcgacgctgtat
cgcaaacgtaaacaatacaacctgtga
DBGET
integrated database retrieval system
