Pseudomonas mucidolens: NCTC8068_01210
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Entry
NCTC8068_01210 CDS
T08935
Symbol
truD
Name
(GenBank) tRNA pseudouridine synthase D
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
pmud
Pseudomonas mucidolens
Brite
KEGG Orthology (KO) [BR:
pmud00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pmud03016
]
NCTC8068_01210 (truD)
Enzymes [BR:
pmud01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
NCTC8068_01210 (truD)
Transfer RNA biogenesis [BR:
pmud03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
NCTC8068_01210 (truD)
Prokaryotic type
NCTC8068_01210 (truD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
SQH32254
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All DBs
Position
1:1347245..1348303
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AA seq
352 aa
AA seq
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MNDLQLLGPRAYGDALGSAVLKATAEDFQVDEVLDIPLTGEGEHLWLWVEKRGLNTEEAA
RRIAKAAGVPLRTVSYAGLKDRQALTRQWFSVQLPGKADPDLSGAENDTLKILKIARHKR
KLQRGAHSANGFTLRLTQLSGDSAALDARLQLIALHGIPNYFGSQRFGHNGGNVVDARAW
AVRKALPEQRNVRSRLLSTARSLLFNKVLAARVADGSWQRAQVGDLLAFTDSRSFFPAGE
AECSDPRLAILDLHPTGPQWGEGDSPASGATHTLEQAVAESEADLRDWLVNAGMSQERRI
LRLPISGLTWHYPEPDILQLEFVLPAGCFATVLVRELVDLVPVGQTDSPCVF
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atgaatgatctgcaactgttaggcccgcgagcctatggcgatgcacttggcagcgcggta
ctcaaggcgacagccgaagactttcaggtcgatgaagtgctggatatcccgctgaccggc
gagggtgaacacttgtggctatgggtggaaaagcgtgggctgaacaccgaggaagctgcg
cggcgcattgccaaggctgccggtgtgccattgcgtaccgtcagctatgccgggctcaag
gatcgccaggcgttgacgcgccaatggttcagcgtgcagctgccgggcaaggctgatccc
gatttgagcggggcggaaaacgacaccctcaagattctgaaaattgctcggcataaacgc
aagttgcagcgcggtgcacattcggccaacggttttactttgcgcctgacccagctgtcc
ggcgatagcgccgcccttgatgcgcgcctgcaactgattgccctgcacgggatccccaat
tatttcggctcccagcgttttgggcataacggcggtaacgtcgttgatgcccgtgcctgg
gcagtacgcaaggccttgccggagcagcgcaacgtgcgttcgcgcctgctgtcgactgca
cgcagcttgctcttcaacaaagtcctggcggcacgggtcgccgatggctcatggcagcgt
gcccaggtcggtgacctgctggcgtttaccgacagccgcagctttttcccggccggcgag
gccgagtgcagtgacccgcgcctggcgatcctcgacctgcatcccaccgggccgcagtgg
ggggagggcgattcgcctgccagcggcgcgacccatacgctggaacaagccgtcgcagag
agcgaggcggacttgcgcgattggctggtgaatgccgggatgagtcaggaacgtcgcatt
ctgcgactgcccattagcgggttgacgtggcattatcccgaacctgacattctgcaattg
gaattcgtcctgccggccggatgcttcgccactgtcttggtgcgcgagcttgttgatctg
gtgccggtggggcagacggacagcccatgcgtattctga
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