KEGG   Pseudomonas multiresinivorans: G4G71_00220
Entry
G4G71_00220       CDS       T07281                                 
Name
(GenBank) RNA polymerase sigma factor
  KO
K23514  RNA polymerase sigma-19 factor, ECF subfamily
Organism
pmui  Pseudomonas multiresinivorans
Pathway
pmui02020  Two-component system
Brite
KEGG Orthology (KO) [BR:pmui00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    G4G71_00220
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pmui03021]
    G4G71_00220
Transcription machinery [BR:pmui03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     G4G71_00220
SSDB
Motif
Pfam: Sigma70_r4_2 Sigma70_r2 Sigma70_r4 HTH_23 Sigma70_ECF MerR Rv2175c_wHTH HTH_17 HTH_24 HTH_29 Sigma70_r3 HTH_11
Other DBs
NCBI-ProteinID: QJP06371
UniProt: A0A7Z3BGC9
LinkDB
Position
51707..52225
AA seq 172 aa
MSAIQMGSGELVGALYRDHRDWLTAWLNRNLGCPQRAEDLSQDTFVRVLGRRELPFLREP
RAFLVTVAKGLLVDHWRRVALEQAYLEELKFLPEAVQPSAEEHCLILADLREIDRLLGKL
STRARSAFLLNRLDGLGHAEIAEQLGVSVPRVRQYIAQGLRQCYIALYGEPT
NT seq 519 nt   +upstreamnt  +downstreamnt
ttgtcggccatccagatgggtagcggcgaactcgttggcgccttgtatcgcgatcaccgc
gactggctgactgcctggctgaaccgcaacctgggctgtccgcagcgcgccgaagacctg
agccaggacaccttcgtccgcgtgctcggccgtcgcgagctgcctttcctgcgcgaaccg
cgcgccttcctggtcaccgtcgccaagggcctgctggtggatcactggcgccgcgtggcg
ctggagcaggcctacctggaagagctgaagttcctgcccgaagccgtgcagccctcggcc
gaggaacactgcctgatcctcgccgacctgcgcgagatcgaccgcctgctgggcaagctg
tccacccgcgcgcgcagcgccttcctgctcaaccgcctggatggcctgggccacgccgag
atcgccgaacaactgggcgtttccgtgccgcgggtgcgccagtacatcgcccagggcctg
cgccagtgctacatcgccttgtacggcgagccgacgtga

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