Prunus mume (Japanese apricot): 103322643
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Entry
103322643 CDS
T03196
Name
(RefSeq) protein transport protein SEC23
KO
K14006
protein transport protein SEC23
Organism
pmum
Prunus mume (Japanese apricot)
Pathway
pmum04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
103322643
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pmum04131
]
103322643
Membrane trafficking [BR:
pmum04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
103322643
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_helical
Sec23_BS
zf-Sec23_Sec24
Gelsolin
Tox-MPTase4
Motif
Other DBs
NCBI-GeneID:
103322643
NCBI-ProteinID:
XP_008222792
LinkDB
All DBs
Position
LG2:complement(28380587..28388266)
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AA seq
772 aa
AA seq
DB search
MSEMANTDPEGIDGVRMTWNVWPRTKVEASKCVIPLAACISPIRAHPDIPTLPYAPLRCK
TCSAALNPFSRVDFTAKIWICPFCYQRNHFPPHYAAISETNLPGELYPQYTTLQYALPAD
SAAPQSLPSPVFVFVLDTCMIEEEMGYVKSALKRAIGLLPDNALVGFLSYGTQVQVHELG
FSDLSKVYVFRGSKEISKEQVLEQLGLGVLGRRPGPVGGGYHPKGVQNGFPNAGVTRFLL
PASDCEYTLNTLLDELQSDQWPVPPGNRSSRCTGVALSVAAGLLGACVPGTGARIVALVG
GPCTEGPGAIVSKDLSEPVRSHKDLDKDAAPYFKKAIKFYDGLAKQLVSQGHVLDLFASA
LDQVGVAEMKVAIEKTGGLVVLAESFGHSVFKDSFKRVFEEGEQSLGLCFNGTLEINCSK
DIKIQGVIGPCTSLEKKGPAVADTAIGEGNTTAWKMCGLDKSTCLTVFFDLSSSDQSNTP
GAVNPQLYLQFLTSFQNPEGQMMLRVTTITRRWIDSTVSSEELVQGFDQETAAVVMARKT
SLKMETEESFDATRWLDRGLIRLCSKFGDYRKDDPSSFTLNPCFSLFPQFMFNLRRSQFV
QVFNNSPDETAYFRVLLNRENITNAAVMIQPSLISYSFNSLPQPALLDVASIAADRILLL
DSYFSIVIFHGMTIAQWRNMGYQNQPEHQAFAQLLQAPHDDTQSIIRDRFPVPRLVVCDQ
HGSQARFLLAKLNPSATYNNAHDMAAGSDVIFTDDVSLQVFFEHLQRLAVQS
NT seq
2319 nt
NT seq
+upstream
nt +downstream
nt
atgtcggagatggcgaacacagacccggaagggatcgacggagtgcggatgacgtggaac
gtttggccacgcactaaggtggaggccagcaagtgcgtgatcccactcgccgcctgcatc
tccccgatccgggcccaccccgacatccccacgctcccatacgcgccgctgcgctgcaag
acctgctctgccgccctcaaccccttctcgcgcgtcgacttcaccgccaagatctggatc
tgccctttctgctaccagcgtaatcacttcccgcctcactatgccgcgatctccgagacc
aacctccctggcgagctctaccctcagtacacaaccctccagtatgctctgcctgccgat
tcagccgcccctcaatctctgccatcgccggtcttcgtctttgtgctcgacacgtgtatg
atcgaggaggagatgggttatgtcaaatcggcgctcaagagagcaattgggttgttgccc
gataatgcgcttgttggatttttgtcgtatgggacccaagttcaggttcatgaattgggg
ttctctgatttgtccaaagtgtatgtctttcgggggagtaaggagatttcaaaagaacag
gttttggagcaattgggtctcggcgttttgggccggagacctggtccggttggtggaggg
taccacccgaagggggttcaaaatgggtttcctaatgcgggtgtgacccgtttcttgttg
cctgcttcggactgcgaatacactcttaatacgttgttggatgaattgcaaagcgaccag
tggcctgtgccacctggaaatcggtcgtcccggtgcacaggagtggcgttgagcgttgca
gccggtttgcttggagcttgtgtgcctggaacgggggcacgcattgtagcgttggttggg
gggccatgcacagaagggcctggcgcgattgtatccaaagatttatcagaaccagtacgt
tcccataaagatctggataaggatgcagcaccatactttaagaaagcaatcaaattttat
gatggtcttgcgaagcagctggttagccagggtcatgtcttagacctgtttgcatctgca
ctggatcaggttggggttgcagaaatgaaagttgccattgaaaaaaccggtggacttgtt
gttctggcagaaagttttggtcattctgtattcaaagactctttcaagcgtgtttttgaa
gaaggggaacagtcgcttggtctttgtttcaatggtacacttgagatcaactgttcaaag
gacatcaaaattcagggcgtcattggaccctgcacatctttggagaagaaaggacctgct
gttgccgatactgctataggggaggggaatacaacagcttggaaaatgtgtggccttgac
aagagtacttgcttgaccgttttctttgatctttcatctagtgatcagtcaaatacacca
ggagctgtaaatccgcaattgtatttgcagtttcttacaagttttcaaaaccctgaaggt
caaatgatgctacgagtaacaacaattactagacgatggatagatagcaccgttagctca
gaggaattggttcaaggatttgaccaagagactgctgctgtagtaatggcaagaaaaacc
tccttgaaaatggagacagaggaatctttcgatgctacacgatggttagatcggggactc
attcgtctctgttccaaatttggtgactatcgaaaagatgatccgtcatcctttacttta
aatccatgtttttcattattccctcaatttatgtttaatctcaggcgttcgcaatttgtg
caggttttcaacaacagtccagatgagactgcctattttcgcgtgttgttaaatcgggaa
aatatcaccaatgcggctgtcatgattcaaccatcattaatatcatattcatttaattct
cttccacaacctgcattgttggatgtggcttcaattgcagccgaccggattctcttgttg
gattcgtattttagtatagtcatttttcatggaatgacaatagcacagtggcgtaacatg
ggataccagaatcagccagaacaccaggcatttgcacaattattgcaagctcctcatgat
gatacacagtcgatcattcgggaccggttccctgttcctagattggtggtgtgtgatcag
catggctcgcaggcaagattcttgttagcaaagttgaacccgtcggcaacatataataat
gcccacgacatggctgcgggttcagatgtaatcttcacagatgatgtaagccttcaagtt
ttctttgagcatcttcagaggttggcagtgcaatcttga
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