Prunus mume (Japanese apricot): 103326691
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Entry
103326691 CDS
T03196
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB7
KO
K03015
DNA-directed RNA polymerase II subunit RPB7
Organism
pmum
Prunus mume (Japanese apricot)
Pathway
pmum03020
RNA polymerase
pmum03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
103326691
09124 Replication and repair
03420 Nucleotide excision repair
103326691
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pmum03021
]
103326691
03019 Messenger RNA biogenesis [BR:
pmum03019
]
103326691
03400 DNA repair and recombination proteins [BR:
pmum03400
]
103326691
Transcription machinery [BR:
pmum03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Pol II specific subunits
103326691
Messenger RNA biogenesis [BR:
pmum03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
103326691
DNA repair and recombination proteins [BR:
pmum03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
103326691
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHS2_Rpb7-N
S1
Sod_Cu
Vg_Tdu
Motif
Other DBs
NCBI-GeneID:
103326691
NCBI-ProteinID:
XP_008227149
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All DBs
Position
LG3:complement(16180440..16185345)
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AA seq
176 aa
AA seq
DB search
MFFHIVLERNMQLHPRHFGRNLRENLVAKLMKDVEGTCSGQHGFVVAITGIENIGKGLIR
DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ
SGDMPNYTTSDGSVKIQKDSEVRLKIIGTRVDATEIFCIGTIKDDFLGVINDPATA
NT seq
531 nt
NT seq
+upstream
nt +downstream
nt
atgtttttccatatagtgttggaaagaaacatgcagcttcatcctcgtcactttggccgc
aatctccgtgaaaatctagtggccaagctcatgaaagatgttgaaggcacttgcagtggt
caacatgggtttgtggttgcaattacgggcatagaaaacattgggaagggcctgattcgc
gatgggacagggtttgtcacattccctgtgaagtaccagtgtgttgttttcagaccattc
aaaggagagatcttagaagctgttgttactatggtgaacaagatgggattttttgctgag
gctggtcctgttcaaatctttgtttcaaaccatttgataccggatgatatggagttccaa
tctggagatatgccaaattatacaacatcagatggatcagttaaaattcagaaagatagc
gaagttcggttaaagataattggaacccgagtggatgctactgaaattttctgcattggt
acaataaaggatgatttcttgggtgtgataaacgatcctgcgactgcttag
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integrated database retrieval system