Prunus mume (Japanese apricot): 103333795
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Entry
103333795 CDS
T03196
Name
(RefSeq) CSC1-like protein At4g02900
KO
K21989
calcium permeable stress-gated cation channel
Organism
pmum
Prunus mume (Japanese apricot)
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pmum02000
]
103333795
Transporters [BR:
pmum02000
]
Other transporters
Pores ion channels [TC:
1
]
103333795
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RSN1_7TM
PHM7_cyt
RSN1_TM
Motif
Other DBs
NCBI-GeneID:
103333795
NCBI-ProteinID:
XP_008234907
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Position
LG6:279..4639
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AA seq
756 aa
AA seq
DB search
MATLQDIAVSAAINILSALGFLVAFALIRLQPFNDRVYFPKWYLKGIRGSPTSSGALVKK
FVNLDAKTYIKFLNWMPAALRMPEPELIEHAGLDSAAYIRIYILGLKIFVPITALALIVL
VPVNYTGNTLGKTREVTFSNIDKLSISNIPSGSPKFWAHMVMSYVFSFWTCFVLYHEYKT
VAAKRLAFLASEKRRPDQFTVLVRNVPPDPDESVSEHIEHFFCVNHPDHYLTHQVVYNAN
KLAAVVEKKKSWNNWLVYYQTRYERNPKSRPTTKTGFLGLWGHKVDAINYYIEEIEKMSQ
EEKQEREKVVSDPDAIMPAAFVSFRTRWGAAVCAQTQQSSNPIVWLTEWASEPRDVYWRN
LAIPYVELNVRKLLMAVAFFSLTFFFMIPIAFVQSLANIEGIMKVLPFLKPLLEMKPVKS
VIQGFLPGIALKIFLAMLPMILMLMSKIEGFTSLSSLDRRSAAKYHLFILINVFLGSIVT
GTALQQLEKLMNEPSTEFTKTVGRSIPMKATFFITYIMVDGWSGVAAEIVRLVPLILFHL
KNTFLVKTEEDREQAMDPGSLNFATNEPRTQLYFLLGLVYCVVTPILLPFILIFFSFAYL
VFRHQIINVYDQKYESAAAFWPQVHLRVIIGLIISQILLMGLFSTLGVAKSTFILVAQPV
LTIWFHRVCKGRFESAFLKFPLQEAMVKDTVEKATEPNLNLMNYLKDAYVHPVFKGGQSQ
KHEDPDEEDSSPLVPTKRTSQMGSKHESDVSSEAKI
NT seq
2271 nt
NT seq
+upstream
nt +downstream
nt
atggcgacccttcaagatatagcagtatcggcggccatcaatatattgtctgcattgggc
tttctcgtggcctttgctctgatacggcttcaaccgttcaacgacagagtctactttccc
aaatggtacctcaaggggatcagaggaagccccacgagttctggggctttggtcaaaaaa
ttcgtcaacttggacgccaaaacctacatcaagtttctcaattggatgccggcggcattg
cggatgcctgagccagagctcattgaacacgcaggcctcgattccgctgcctacattcgg
atttatatactcgggttgaagatatttgtccccattactgcgcttgcgcttattgttttg
gtgcctgtcaattataccggaaatacgctgggaaagacccgtgaagtaacattcagcaat
atcgataagctctcaatatccaatattccttccggatctcccaagttttgggcacatatg
gtgatgtcttatgtcttctccttttggacgtgctttgttttataccatgaatacaagaca
gtggctgctaaaaggcttgcatttttagcatctgaaaaacgccgtccagatcaatttacg
gttcttgtaaggaatgtacccccagatcctgatgaatcagtcagtgagcatattgaacat
ttcttctgcgtaaaccatcccgatcactaccttacacatcaagttgtatacaatgcaaat
aaacttgcagcggtggtcgagaagaagaagagttggaataactggcttgtttactaccaa
accagatatgaaagaaaccctaagtcaaggcctactacaaagacaggtttcttgggcctg
tggggacataaagtggacgcgattaattactacattgaggagattgagaagatgagccaa
gaagaaaaacaagaaagggaaaaggttgtaagtgatcctgatgccataatgcctgcagca
tttgtttcattcagaactcgatggggagcagctgtatgtgctcaaactcagcaatcaagt
aatcctatcgtctggttgacagagtgggcttctgagccacgcgacgtctattggagaaat
cttgcaattccatatgttgaactcaatgttcggaaactactcatggctgtagcctttttt
tcccttactttcttctttatgattccaatagcattcgtccaatctctagccaacattgag
gggattatgaaggtccttcctttcttgaagccactgctggagatgaagcccgttaagtct
gtcatccaaggttttcttccaggaattgcattaaagatattccttgctatgcttccaatg
attcttatgctaatgtccaagatagaaggtttcacatcactctcatctctggataggagg
tctgctgcgaagtatcatttgttcatacttataaatgtgtttctgggaagcattgttaca
ggaacagcacttcagcagcttgagaaacttatgaacgagccctcaacagagttcacaaaa
actgttgggaggtccattccaatgaaagccacattcttcatcacttatatcatggttgat
ggttggagtggagttgctgcagaaatcgtcagattggttccattaattttgttccacctt
aagaacacatttttggtcaagacagaagaagacagggagcaggcaatggatcctggttcc
ctgaactttgctacaaatgaacctaggacacagttatattttctgctggggcttgtgtat
tgcgttgtcacacctatacttcttcctttcattcttatcttcttctctttcgcctaccta
gttttccgtcatcagattattaatgtctatgaccagaaatatgagagtgcggcagccttc
tggccacaagtgcatctgcgggtaattattggcctaatcatatcccaaattcttctaatg
gggctatttagcacattaggtgttgcaaaatcaacatttattctcgttgcacagcctgtt
ttgacaatctggttccatagagtctgcaagggacgtttcgaatcagcattccttaaattc
ccattgcaggaagcaatggtgaaggatacagttgaaaaggcaacagaaccaaacctgaat
ttgatgaactatcttaaggatgcttatgtacatcctgtgttcaagggagggcagtcgcag
aaacatgaagaccctgatgaagaagacagcagccctcttgttcccacaaagagaacatcc
caaatgggaagcaaacatgagtctgacgtcagttctgaagctaaaatttga
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