Prunus mume (Japanese apricot): 103336859
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Entry
103336859 CDS
T03196
Name
(RefSeq) heat shock factor protein HSF8
KO
K09419
heat shock transcription factor, other eukaryote
Organism
pmum
Prunus mume (Japanese apricot)
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pmum03000
]
103336859
Transcription factors [BR:
pmum03000
]
Eukaryotic type
Helix-turn-helix
Heat shock factors
103336859
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HSF_DNA-bind
CLZ
HAUS-augmin3
XhlA
TMEM43
CENP-F_leu_zip
APG6_N
Motif
Other DBs
NCBI-GeneID:
103336859
NCBI-ProteinID:
XP_008238205
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Position
LG7:complement(2879873..2883904)
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AA seq
514 aa
AA seq
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MGGANNNGDDASMAGGGAQQAGLAPAPAPLLNSNAPPPFLSKTYDMVDDPATDQVVSWSP
TNNSFVVWNPPEFARDLLPKYFKHNNFSSFVRQLNTYGFRKVDPDRWEFANEGFLRGQKH
LLKSINRRKPAHGHSHQQPQPSQGQNSVAACVEVGKFGLEEEVERLKRDKNVLMQELIKL
RQQQQSTDNQLQAMVQRLQGMEQRQQQMMSFLAKAVQSPSFLTQFVQQQNESNRRIIEVN
KKRRLKQDEGGDSGTSDGQIVKYQPPVNEAAKAMLRQIMTTDTSSSRLESFNDTPDNILT
GNGSSSSSSLIDSGSSSSRASGVTLQEVPLTSGLGSSSAISEVQSSLQAANSGTVTRAPF
SDINALVGAQEAQSIPISQAGVIIPQLSQVPEMVPECLVDIPEENMAPDAGVGFIENMAS
DAGDGFIGDILGLDGSMTIDIDSIPPDPDIEALLKNWDQFLQSPEPDEMDSTSAGVPMGN
EEQPSTENGWDKTQHNMDNLTEKMERLTSDTKGV
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atgggaggtgctaataacaacggcgacgatgcatcaatggccggcggcggagcccagcag
gcgggtttggctccggcgccagcaccgttactgaactcgaacgcgccgccgccttttctg
agcaagacgtacgacatggtggacgacccggcgaccgaccaggttgtgtcgtggagcccc
accaacaacagcttcgtggtttggaacccgccggagtttgctagggaccttctgcccaag
tacttcaagcacaataacttctccagctttgtgaggcagttgaacacctatggatttagg
aaggttgacccagaccgctgggaatttgcaaatgagggctttttgaggggtcagaagcat
ctccttaagagtatcaaccggcgaaaacctgcgcatggacatagtcatcaacagccacag
ccatcacaaggacagaattcagtggctgcatgtgtagaggttgggaagtttggccttgag
gaagaagttgagaggctaaaaagggacaagaatgtgcttatgcaggaacttatcaagttg
aggcagcagcaacagtctactgataaccagctgcaagcaatggtgcaacgtcttcagggt
atggaacagcggcagcaacagatgatgtcattccttgcaaaggctgtgcagagcccaagt
ttcttgactcagtttgtacagcagcagaatgagagcaataggcgcataattgaagtcaac
aaaaaacggaggctcaagcaggatgagggcggggactctggtacttctgatggacagatt
gtgaagtatcagcctccagtgaatgaagctgcaaaggcaatgctcaggcagattatgaca
acagatacttcttcttcccggctggaatcttttaatgacacccctgataacatcctgact
gggaatggctcatcatcatcatccagtttaatagacagtgggagctcttcaagccgtgcg
tcaggagtgacccttcaagaagtcccgctgacttcagggcttggttcgtcatctgcaatt
tctgaagtacaatcttctctacaggctgcaaactctggaacagttacgagagctccattc
tcagatataaatgccctcgttggagcacaagaggcacaatcaatccctatttctcaggct
ggtgtaatcatcccccagctttctcaagtaccggaaatggtacccgaatgtttagttgat
attcctgaagaaaacatggcacctgatgcgggtgttggatttattgaaaacatggcatct
gacgcaggtgatggatttatcggcgacatattgggattggatgggtcaatgaccatagac
attgatagtattcctcctgatcctgacatagaagcattgctaaagaattgggatcaattt
ttacaaagtccagagccagatgaaatggattctacttctgcaggagtgcccatgggaaat
gaagagcagccgtcaacagagaatggatgggacaaaacccagcataatatggataacctt
actgaaaaaatggaacgtcttacttcagataccaaaggggtttga
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