Prunus mume (Japanese apricot): 103338804
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Entry
103338804 CDS
T03196
Name
(RefSeq) coatomer subunit alpha-1
KO
K05236
coatomer subunit alpha
Organism
pmum
Prunus mume (Japanese apricot)
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pmum04131
]
103338804
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pmum04147
]
103338804
Membrane trafficking [BR:
pmum04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
103338804
Exosome [BR:
pmum04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
103338804
Exosomal proteins of bladder cancer cells
103338804
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
COPI_C
Coatomer_WDAD
WD40
ANAPC4_WD40
NBCH_WD40
TPR_2
TPR_19
zinc_ribbon_9
Motif
Other DBs
NCBI-GeneID:
103338804
NCBI-ProteinID:
XP_008240283
LinkDB
All DBs
Position
LG7:16522858..16529515
Genome browser
AA seq
1218 aa
AA seq
DB search
MLTKFETKSNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFH
KSQPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIW
NWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGSLKKKTVSPADDILR
LSQMNTDLFGGVDAVVKYVLEGHDRGVNWASFHPNLPLIVSGADDRQVKLWRMNDTKAWE
VDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRVWDVTKRTGIQTFRREHDRFWILSSHP
EMNLLAAGHDSGMIVFKLERERPAFAVSGDSLFYAKDRFLRYYEFSTQRDTQVIPIRRPG
STTLNQSPRTLSYSPSENAVLICSDLDGGSYELYLIPKDSISRGDSMQDAKRGVGGSAVF
MARNRFAVLDKSNNQVLIKNLKNEVVKRSGIPFAVDAIFYAGTGNLLCRAEDRVSIFDLQ
QRIVLGELQTPFIKYVVWSNDMESVALLSKHAIIIASKRLVHQCTLHETIRVKSGGWDDN
GVFIYTTLNHIKYCLPNGDSGIIRTLDVPIYITKVSGNTIFCLDRDGKNRAIVIDATEYI
FKLSLFKKRYDHVMSMIRSSQLCGQAMIAYLQQKGFPEVALHFVKDERTRFNLALESGNI
QIAVASATAIDEKDYWYRLGVEALRQGNAGIVEYAYQKTKNFERLSFLYLVTGNMEKLSK
MLKIAEVKNDVMGQFHNALYLGNVQERIKILENVGHLPLAYITASVHGLHDVAERLSAEL
GENVPTLPQGKVPTLLMPPTPVMCGGDWPLLRVMRGIFEGGLDNIGRGAADEEDEAADGD
WGEELDMVDVDGLQNGDVTAVLEDEEVAEGNEEGGGWDLEDLELPPEADTPRASVNSNSS
VFVAPTIGMPVSQIWIQRSSLAAEHAAAGNFDTAMRLLNRQLGIKNFAPLRPMFLDLHTG
SHSYLRAFSSTPVISLAVERGWNESATPNVRGPPALVFNFSQLEEKLKAGYKATTAGKLT
EALRLFLSILHTIPLIVVDSRREVDEVKELIIIVREYVLGLHMELKRREIKDNPVREQEL
AAYFTHCNLQMPHVRLALVNAARICFKAKNFATAANFARRLLETNPTIEIQAKTARQVLQ
GAERNMTDASQLNYDFRNPFVTCGATYVPIYRGQKDVSCPYCSSRFVPTQEGQLCTVCDL
AVVGADASGLLCSPTQVR
NT seq
3657 nt
NT seq
+upstream
nt +downstream
nt
atgttgaccaagtttgaaacgaagagtaatagagtgaagggactgagcttccacagtaag
agaccgtggatcctcgcaagtcttcacagtggtgtgatccagctatgggactaccgtatg
gggactctcattgatcgattcgacgagcatgatgggcccgttcgcggtgtccacttccac
aaatctcagcctctctttgtgtctggaggggatgattataagatcaaagtttggaactat
aagatgcataggtgtctgtttacacttcttgggcaccttgattatattcgtaccgtgcag
tttcaccatgagtacccatggattgttagtgccagtgatgaccagaccattcgtatatgg
aactggcagtcacgtacttgcatttcagttttgacaggccacaatcattatgtcatgtgt
gcctcattccatcctaaagaagaccttgttgtatctgcctccttagatcagactgtccgt
gtttgggatattggttccctcaagaagaagaccgtatcccctgcagatgacatactacga
ctaagtcagatgaatacagatctttttggtggtgttgatgctgttgttaagtatgtcttg
gaagggcatgatcgaggtgttaattgggcttcattccatccgaacctacctttgattgtc
tcaggcgcagatgatcgccaagttaaattgtggcggatgaatgatacaaaggcttgggaa
gtggacacactgagagggcacatgaataatgtttcatgtgttatgtttcatgccaaacag
gacataattgtatcaaactcggaagacaaaagtatccgtgtttgggacgtaacaaagcga
actggaattcaaactttccgacgagagcatgaccgtttttggattctttcatctcaccct
gaaatgaatctgttggctgcaggtcatgacagtggcatgatcgtatttaagttagagagg
gaacgtccagcctttgctgtgagtggtgattctctgttctatgctaaggatcgcttcttg
cgatactatgagttttcaacccaaagggacacacaagttattccaattcgacgccctggt
tccaccactttaaatcaaagtccgaggactctttcttacagtccttcagaaaatgcagtt
cttatttgctcagacttggacgggggatcttacgaattgtatttgatacccaaggacagc
attagtaggggtgacagtatgcaagatgcaaagagaggtgttggaggttcagctgtgttt
atggcacgaaataggtttgctgtgcttgacaaaagcaacaaccaagtcttgattaagaat
ttgaaaaatgaggttgttaaaaggagtggtattccttttgctgttgatgcaatattttat
gccggaacaggtaatttgctgtgtagggcagaggacagagtgtctatatttgacctccag
cagaggattgttcttggagagcttcaaacccccttcatcaagtatgttgtttggtccaat
gacatggaaagtgttgccttgctcagcaaacacgccattattattgctagcaagaggctt
gtgcaccagtgtactcttcatgagacaattcgtgtaaagagtggtggctgggatgacaat
ggtgttttcatttacacgactctaaatcacataaaatattgtctccctaatggagatagt
gggataatcagaaccctagatgttcctatatacattacgaaggtttctggaaataccatc
ttttgcttggatcgggatgggaaaaacagagccatagttattgatgccactgaatacatt
ttcaagttatccctgtttaagaagagatatgaccatgttatgagcatgataaggagctca
cagctctgtgggcaggcaatgattgcttatctgcaacagaaggggttccccgaagttgct
ctccattttgtgaaagatgaaagaaccagattcaatctggccctagagagtgggaatatt
caaattgcagtggcatccgctacagcaattgatgaaaaagattactggtataggttgggg
gtggaggctcttcgtcagggcaatgcaggtattgtggagtatgcctaccagaagactaaa
aattttgagaggctatctttcctttatctcgtaactggtaatatggaaaagctgtcaaag
atgctgaaaattgctgaggttaagaatgatgtcatgggtcagttccacaatgcactgtat
ctaggcaatgtccaggagcgtattaagatcttggagaacgttggccacttaccccttgct
tacatcacagcttcagttcatggcctacatgatgttgctgaacggctatctgctgagttg
ggagaaaatgttccaaccttgccgcaggggaaagtacccactcttttgatgcccccaacg
ccagttatgtgcggtggtgattggcctcttcttagagtcatgagaggtatatttgaaggt
gggttggataatattggcaggggagctgcagacgaagaggatgaggctgctgatggtgac
tggggtgaggagctggacatggttgacgttgatggcttgcaaaatggagatgtcactgct
gtattggaagatgaggaagtggctgaaggaaatgaggaagggggaggatgggaccttgaa
gatttggagctcccccctgaagcggacacaccaagggcttcggttaattctaattcatca
gtttttgttgctccgactattggcatgcctgtaagccagatttggatccagagatcttct
cttgctgctgaacatgcagcagcaggaaattttgatactgcaatgcgcttgctgaacagg
cagcttggaataaaaaactttgctcccttgagacccatgtttcttgatcttcacactggc
agtcacagctatctacgtgcattttcatctactcctgtgatatcacttgctgttgagcga
gggtggaatgaatctgctaccccaaatgtgagaggcccaccagcacttgtgttcaatttt
tctcagttggaagagaaactcaaagctggttacaaggctacaacagctgggaagttaact
gaagctcttaggctcttccttagtattcttcacacaattcctttgattgttgttgattca
aggagggaagttgatgaagttaaggagttaattataatagtgagagagtatgttctggga
ttgcacatggagctgaagagaagggaaattaaggataatccagtacgtgaacaggagctt
gcagcttatttcacacactgcaatcttcaaatgcctcacgtaaggcttgcattggttaat
gcagcgagaatttgcttcaaggcaaagaactttgccactgcagctaactttgccaggcgg
ctattggaaaccaaccccaccatcgagattcaagcaaagacagccaggcaagtgctgcaa
ggagcagagaggaatatgactgatgcctctcaactgaattatgatttcagaaacccattt
gtgacttgtggggcaacatatgtaccaatttaccgaggacagaaggatgtctcttgcccg
tactgtagctcacggtttgtgccaactcaagaagggcagctctgtactgtttgtgatctt
gcagtggttggggcagatgcttcagggttgctatgttctcctactcaggttcgatag
DBGET
integrated database retrieval system
