Prunus mume (Japanese apricot): 103344016
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Entry
103344016 CDS
T03196
Name
(RefSeq) DNA topoisomerase 1-like
KO
K03163
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
pmum
Prunus mume (Japanese apricot)
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pmum03032
]
103344016
Enzymes [BR:
pmum01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
103344016
DNA replication proteins [BR:
pmum03032
]
Eukaryotic type
DNA Topoisomerases
103344016
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I_N
Topoisom_I
Topo_C_assoc
Motif
Other DBs
NCBI-GeneID:
103344016
NCBI-ProteinID:
XP_008245865
LinkDB
All DBs
Position
Unknown
AA seq
724 aa
AA seq
DB search
SEDAKPIKARLGKPCEDSDDDKPLSSRITPKKVGTLGSQPYDSKERKPVASKVQKNCSST
TDKGKTSFVISTKRPLDKANISEKSSAKRPKVSDSSTSIKNMQVSAKKEPKEEDDDDFIP
ISQRIKKPTSDNKSPVTKQKVTKVGPSSIKKKIKKGQKASQFSKYSKSTTVPPSSNDGQK
KWTSLVHNGVIFPPPYKPHGVKMLYSGKPVTLSPEQEEVATMYAVMKDTDYVQKQTFRNN
FWNDWHKLLGKNHIIQKLDACDFSPIYDWYQNEKEKKKQMSTEEKKALKEDKLKEEEKYM
WAVVDGVKEKVGNFRVEPPGLFRGRGEHPKSGKLKRRIRPSDVTINIGKDAPIPECPIPG
ESWKEVRHDNTVTWLAFWNDPINQREFKYVFLAPSSSLKGQSDKEKYEKARMLKDYIGNI
RAAYTRDFTSKDGTKRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVKAIAPN
SLEFNFLGKDSIRYENTVEVEIPVYKAIIQFQIGKRGCDDLFDRLDTSKLNAHLKELMPG
LTAKVFRTYNASITLDNILNKETKEGDLSEKVVVYQHANKEVAIICNHQRTISKTHSAQM
SRLLEKIGNLQSILKELKTDLDRAKKGRPPLKDADGKQKRNLTPEALERKIAQTTVKIEK
MELDMRTKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIFNKSLLAKFAWAMDVDP
DFRF
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
tctgaagatgcaaaaccgataaaagcccgactggggaaaccttgtgaagattcggatgat
gataaacctttatcatcaagaattacaccaaagaaggtgggaactttaggcagtcagcct
tatgattctaaagaaaggaagcctgtggcttcaaaagttcagaagaattgttccagcaca
acagataaaggcaaaacttcttttgtgatctctactaagaggcctctagataaggccaat
atttctgagaagtcctcagctaaaaggccaaaagtttcagattcttctacatctataaag
aatatgcaggtatcagccaaaaaagaaccaaaggaagaagatgatgatgacttcattcca
atttcccagaggattaagaaacctacatcagataataaatcacctgtgacaaagcaaaag
gtaacaaaagttggcccatcctcaatcaagaaaaagatcaagaagggccaaaaagcttcg
caattttcaaagtattctaagtctactacagttccaccaagctctaatgatgggcagaaa
aaatggactagtttagttcacaatggtgtcattttcccacctccatacaagcctcatggg
gttaagatgctttatagtgggaagccagtcaccttgagtcctgaacaagaggaggttgca
acaatgtatgcagtgatgaaagatacagattatgtgcagaaacaaacattcagaaacaat
ttctggaatgattggcataagttgcttgggaagaaccacataattcagaaattggatgct
tgtgattttagcccaatatatgactggtatcagaatgaaaaggaaaaaaagaaacagatg
agtacggaagagaagaaggccttgaaggaagataaactcaaagaagaggagaagtatatg
tgggccgtcgtcgatggtgtaaaagagaaggttggaaacttcagagttgaaccacctgga
ttattccgaggtcgtggagagcatccgaagtcggggaagctgaaaaggcggattcgtcca
agtgatgttacaattaatataggaaaagatgccccaattccagaatgtcccatccctggt
gaaagctggaaagaagtaaggcatgacaatacggttacatggttagctttctggaacgat
ccaattaatcaaagggagttcaaatatgtgtttctggcacctagtagttccttgaagggg
caaagcgacaaggaaaaatatgagaaagcaaggatgctgaaggactacataggaaacatc
agggctgcatacactagggattttactagtaaagatggtactaagcggcagatagcagtt
gctacatatctcattgataaacttgctctcagggctggaaatgagaaggacgatgatgaa
gctgatactgttggttgctgcactttaaaagtagagaatgtaaaagcaattgcccctaac
tcgttggagtttaacttccttggtaaagattcaatcagatatgaaaatactgttgaagtt
gagattcctgtttacaaggcaattatacagttccagattgggaaacgtggctgtgatgat
ctctttgacaggttggataccagtaaattgaatgctcatctaaaggaactgatgcctggc
cttacagcaaaagtgttccgtacctacaatgcttctattacattggataacatattgaac
aaggaaacgaaagagggagatctttcagagaaagttgttgtttatcagcatgcaaacaaa
gaggttgccataatttgtaatcatcagcgtactatctcaaagactcatagtgcacaaatg
tctaggttacttgagaagattggtaaccttcagagcatcctgaaagagctgaaaacagat
ttggacagggctaaaaaaggaaggcccccactgaaagatgctgatgggaaacaaaaaaga
aatttgaccccagaagcattagagaggaagatagctcaaacgactgtaaagattgaaaaa
atggaactggatatgagaaccaaagaggatctgaaaacagtggcattgggaacgtccaaa
attaactatctagaccctaggatcactgttgcatggtgcaagcgacatgaagttccaatt
gagaagatattcaacaagtctctcctggcaaagtttgcttgggcaatggatgtcgatcct
gacttcagattctga
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