Pseudomonas muyukensis: KSS95_11350
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Entry
KSS95_11350 CDS
T07704
Symbol
fadB
Name
(GenBank) fatty acid oxidation complex subunit alpha FadB
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
pmuy
Pseudomonas muyukensis
Pathway
pmuy00071
Fatty acid degradation
pmuy00280
Valine, leucine and isoleucine degradation
pmuy00310
Lysine degradation
pmuy00362
Benzoate degradation
pmuy00380
Tryptophan metabolism
pmuy00410
beta-Alanine metabolism
pmuy00640
Propanoate metabolism
pmuy00650
Butanoate metabolism
pmuy00907
Pinene, camphor and geraniol degradation
pmuy00930
Caprolactam degradation
pmuy01100
Metabolic pathways
pmuy01110
Biosynthesis of secondary metabolites
pmuy01120
Microbial metabolism in diverse environments
pmuy01200
Carbon metabolism
pmuy01212
Fatty acid metabolism
Module
pmuy_M00087
beta-Oxidation
pmuy_M00957
Lysine degradation, bacteria, L-lysine => glutarate => succinate/acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
pmuy00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
KSS95_11350 (fadB)
00650 Butanoate metabolism
KSS95_11350 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
KSS95_11350 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
KSS95_11350 (fadB)
00310 Lysine degradation
KSS95_11350 (fadB)
00380 Tryptophan metabolism
KSS95_11350 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
KSS95_11350 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
KSS95_11350 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
KSS95_11350 (fadB)
00930 Caprolactam degradation
KSS95_11350 (fadB)
Enzymes [BR:
pmuy01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
KSS95_11350 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
KSS95_11350 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
KSS95_11350 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
KSS95_11350 (fadB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
Motif
Other DBs
NCBI-ProteinID:
QXH37378
LinkDB
All DBs
Position
2527038..2529185
Genome browser
AA seq
715 aa
AA seq
DB search
MIYEGKAITVKALESGIVELKFDLKGESVNKFNRLTLNELRQAVDAIKADASVKGVIVSS
GKDVFIVGADITEFVDNFKLPEAELVAGNLEANRIFSDFEDLQVPTVVAINGIALGGGLE
MCLAADYRVMSSTAKIGLPEVKLGIYPGFGGTVRLPRLIGSDNAIEWIASGKENRAEDAL
KVGAVDAVVTPELLQAGALDLVKRAISGELDYKAKRQPKLEKLKLNAIEQMMAFETAKGF
VAGQAGPNYPAPVEAIKSIQKAANFGRDKALEVEAAGFAKLAKTSVAESLIGLFLNDQEL
KRKAKAHDEIAHDVKQAAVLGAGIMGGGIAYQSAVKGTPILMKDIREDAIQLGLNEASKL
LGKRVEKGRLTPAKMAEALNAIRPTLSYGDFANVDIVVEAVVENPKVKQAVLAEVEGQVK
DDAILASNTSTISINLLAKALKRPENFVGMHFFNPVHMMPLVEVIRGEKSSDVAVATTVA
YAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFAKLVSAGVDFVRIDKVMEKFGWPMGPAYL
MDVVGIDTGHHGRDVMAEGFPDRMKDDRRSAVDALYEANRLGQKNGKGFYAYETDKRGKP
KKVADATVLDVLKPIVFEQREVSDEDIINWMMIPLCLETVRCLEDGIVATAAEADMGLVY
GIGFPPFRGGALRYIDAIGVAEFVALADKYADLGPLYHPTAKLREMAKNGQRFFN
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgatttacgaaggtaaagccatcacggttaaggctcttgaaagcggcatcgtcgaactg
aagttcgacctcaagggtgagtccgtcaacaagttcaaccgcctcactctgaacgagctg
cgccaggcagtggacgcgatcaaggccgatgcgtcggtcaagggcgtgatcgtcagcagt
ggcaaggacgtgttcatcgtcggcgccgacatcaccgagttcgtcgacaacttcaagctg
cccgaggccgaactggtcgccggcaacctggaagccaaccgcattttcagtgacttcgaa
gacctgcaggtgccgaccgtcgtcgccatcaacggtatcgccctgggtggcggcctggag
atgtgcctggccgccgactaccgggtcatgtccagcactgccaagatcggcctgccggaa
gtcaagctgggcatctacccaggctttggcggcaccgtgcgcctgccgcgcctgatcggt
tcggacaacgccatcgaatggatcgcctcgggcaaggaaaaccgcgccgaagacgccctg
aaggtcggcgccgtcgatgccgtggtcacccccgagctgctccaggccggtgccctggac
ctggtcaagcgcgccatcagcggcgagctggactacaaggccaagcgccagccgaagctg
gaaaaactcaagctcaatgccatcgagcagatgatggccttcgagaccgccaagggcttc
gtcgccggccaggccggcccgaactacccggccccggtagaagccatcaagagcatccag
aaagccgccaacttcggccgcgacaaggccctggaagtcgaggccgccggcttcgccaaa
ctggccaagacctcggtcgccgaaagcctgatcggcctgttcctcaatgaccaggagctc
aagcgcaaggccaaggcccatgacgagatcgcccacgacgtgaagcaggccgccgtgctc
ggcgccggcatcatgggtggcggcatcgcctaccagtcggcagtcaagggcaccccgatc
ctgatgaaggacatccgcgaggatgccatccagctgggcctgaacgaagcctccaagctg
ctcggcaagcgcgtcgagaagggtcgcctgactccggcgaaaatggccgaggcactcaat
gccatccgtccgaccctgtcctacggcgacttcgccaatgtcgacatcgtcgtcgaagcc
gtggtcgagaacccgaaggtcaagcaggcggtgctggccgaggtggaagggcaggttaag
gatgacgccatcctcgcctccaacacctcgaccatctccatcaacctgctggccaaggcg
ctcaagcgcccggaaaacttcgtcggcatgcacttcttcaacccagtgcacatgatgccg
ctggtggaagtgattcgtggcgagaagtccagtgacgtggcggtcgccaccaccgtggcc
tacgccaagaaaatgggcaagaacccgatcgtggtcaacgactgcccgggcttcttggtc
aaccgtgtgctgttcccgtacttcggcggcttcgccaagctggtcagcgcgggtgtcgac
ttcgtgcgcatcgacaaggtcatggagaagttcggctggccaatgggcccggcctacctg
atggacgtggtcggcatcgacaccggccaccatggccgcgacgtgatggctgaaggcttc
ccggaccgcatgaaggacgaccgtcgctcggccgtcgacgccctgtacgaggccaatcgc
ctgggccagaagaacggcaagggcttctatgcctacgagaccgacaagcgcggcaagccg
aagaaggtcgccgacgccacggtgctcgacgtgctcaagccgatcgtcttcgaacagcgt
gaagtcagcgacgaagacatcatcaactggatgatgatcccgctgtgcctggagaccgtg
cgctgcctggaagacggcatcgtcgccaccgccgccgaagccgacatgggcctggtctac
ggcatcggcttccctcccttccgcggtggcgcgctgcgctacatcgatgcgatcggggtc
gccgagttcgtcgcactggccgacaagtacgccgacctggggccgctgtaccaccccact
gcgaagctgcgcgaaatggccaagaacggccagcgcttcttcaactga
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