Pasteurella multocida subsp. multocida HN06: PMCN06_0560
Help
Entry
PMCN06_0560 CDS
T01776
Symbol
ispA
Name
(GenBank) geranyltranstransferase
KO
K00795
farnesyl diphosphate synthase [EC:
2.5.1.1
2.5.1.10
]
Organism
pmv
Pasteurella multocida subsp. multocida HN06
Pathway
pmv00900
Terpenoid backbone biosynthesis
pmv01100
Metabolic pathways
pmv01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
pmv00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
PMCN06_0560 (ispA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
pmv01006
]
PMCN06_0560 (ispA)
Enzymes [BR:
pmv01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
PMCN06_0560 (ispA)
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
PMCN06_0560 (ispA)
Prenyltransferases [BR:
pmv01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
PMCN06_0560 (ispA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Gon7
Motif
Other DBs
NCBI-ProteinID:
AFF23812
LinkDB
All DBs
Position
complement(594966..595853)
Genome browser
AA seq
295 aa
AA seq
DB search
MYQLSQDLPQLQQRINTFLAQQLDVDSSPSPLAEAMRYGVLLGGKRIRPFLVYATGRMLG
ADLNQLDYAAASVEAVHAYSLIHDDLPAMDDDHLRRGQPTCHIAFDHATAILAGDALQAF
AFEILTQAPALQAEQKLALVQTLSQAAGVKGMCLGQSLDLISEQKHISLIELEQIHRNKT
GAMLSAAIQLGRICSPHFKNDTLAQQLQRYSEAIGLAFQVQDDILDIEGESDIIGKTVGS
DLLADKSTYPKLLGLAGAKQKAQELYQNAIAELESIPFDTSALRAIAEFVVNRKS
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atgtaccaactttcacaagacttaccccaactccaacaacgtattaatacttttttagcg
caacaattggatgtggacagcagcccctctcctcttgccgaagccatgcgttacggtgtg
ctccttggtggtaaacgtatccgtcctttcctagtgtatgcaacaggacgaatgctcggc
gcagacttaaaccaactcgattatgccgcggcgagtgtagaagccgttcatgcctattca
ttaattcacgacgatctccctgcgatggatgatgatcatttacgtcgtggacaaccaact
tgccatattgcttttgatcacgccactgcgattttagccggtgacgcgttgcaagccttt
gcttttgaaatattaactcaagcacctgcattgcaagcagagcaaaaacttgcgttggta
caaacgctaagtcaagcagctggtgtaaaaggaatgtgtttggggcaaagtctcgatctg
atttctgagcaaaaacacattagcttaatcgaattagaacaaattcaccgcaataaaacg
ggggcaatgctttccgcagcgattcagcttgggcgaatttgttctccgcattttaaaaat
gatacgctagcacaacaattacaacggtattcggaagccattggcttagcctttcaagta
caagacgatattttagatattgaaggcgaaagtgacattattggtaaaaccgtgggttct
gatttattagcagataaaagcacctaccccaaattattaggcttagcgggtgccaaacaa
aaagcgcaagaactgtatcaaaacgcaatcgcggaattagaaagtattccttttgatacc
agtgcacttcgtgctatcgctgaatttgtggtaaatagaaaaagttaa
DBGET
integrated database retrieval system
