Persephonella marina: PERMA_0624
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Entry
PERMA_0624 CDS
T00870
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoylalanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
pmx
Persephonella marina
Pathway
pmx00470
D-Amino acid metabolism
pmx00550
Peptidoglycan biosynthesis
pmx01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pmx00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
PERMA_0624 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
PERMA_0624 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pmx01011
]
PERMA_0624 (murD)
Enzymes [BR:
pmx01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
PERMA_0624 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
pmx01011
]
Precursor biosynthesis
Amino acid ligase
PERMA_0624 (murD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
MurD-like_N
MurD_N
Motif
Other DBs
NCBI-ProteinID:
ACO04458
UniProt:
C0QUP8
LinkDB
All DBs
Position
complement(578228..579487)
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AA seq
419 aa
AA seq
DB search
MILIYGKGKTGKGVERLLKKKSIPYKITDDTDFNTDLLENTDLIVVSPGIPFFHRIYKEA
RIRKIPVVGEIEFSYRFFDGSVIAVTGTDGKSTTSKLIHHIIGEEKADIGGNYGTPFSDI
VSEGKDTVVLELSSFQIYSTEMFRPDIAVFLNFYPDHLDWHKKLLHYRLSKYRLFRNMKE
EDPAVLNFDDQVVRNTPKKGKRYYFSLSPLPDNLEGAYYDGSEIVLKINGFKFKFGLSDI
HLKGIHNIQNIMASVVTAYIYGIDPETIEERLKSFKPLPHRMEYVGSINGVDFYNDSKAT
TVQAVKKAVQSFDGKRVILITGGINKGGDFSDLRDELLNSVKEVFIIGRDRKSIYSMIKD
YVKAEIKESLEDAVNTAFKKAEKGDVILLSPGCASFDMFKNYQERGEIFKSIVRKLKDG
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
ttgattctcatttacggtaagggaaaaacaggtaaaggggttgaaaggcttttaaagaaa
aagagtataccctataaaataacggatgatacagatttcaacacagacctacttgagaat
actgatcttatagttgtatctcctggaatccctttttttcacaggatttataaagaagca
agaataagaaagatacctgttgtaggggagatagagttttcttacagattttttgatgga
agtgtaatagctgttactggtacagatggaaaatcaacaacatcaaaacttatacaccat
ataataggggaagaaaaagctgatataggtggtaattacggtactcctttcagtgatata
gtttcagaagggaaagatacagttgttttagagctttcttccttccagatttactcaaca
gagatgttcaggcctgatatcgctgtattcctaaatttttatcctgatcatcttgactgg
cataagaagcttttacattacagactttcaaagtacagacttttcaggaatatgaaagag
gaagatcctgccgttctgaattttgatgatcaggttgtaagaaacaccccaaaaaaagga
aaaaggtactatttctcactgtcacctctccctgacaatcttgaaggggcgtactatgat
ggttcggaaatagttttaaaaataaacggctttaaattcaagttcggactatctgatatc
catctaaaaggtatccataacattcagaatattatggcatcagttgtaacagcatacatt
tacggcattgatcctgaaacgatagaggagagattaaagagcttcaaacctctacctcac
agaatggagtatgtggggagtataaatggtgttgatttttacaacgactctaaagcaaca
acagtccaggctgtcaagaaggctgtccagagttttgatgggaaaagagtgatacttata
acaggtggtataaacaaaggtggcgatttctcagatctcagggatgagcttttaaactca
gtaaaggaagtttttatcatagggagggacaggaaaagtatctacagtatgataaaggat
tatgttaaggctgagatcaaggaaagtttagaagatgctgttaacaccgcatttaaaaaa
gccgaaaaaggagatgtgatacttctatctcccggctgtgcaagttttgatatgttcaaa
aactaccaggaaaggggggaaatatttaaaagtatagtaaggaaattaaaggatggttag
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