Pseudomonas mendocina ymp: Pmen_0361
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Entry
Pmen_0361 CDS
T00510
Name
(GenBank) diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s)
Organism
pmy
Pseudomonas mendocina ymp
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
PAS_9
PAS_4
PAS
PAS_3
PAS_8
MASE1
PAS_7
PAS_11
FAA_hydrolase
Motif
Other DBs
NCBI-ProteinID:
ABP83134
UniProt:
A4XP68
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Position
372096..375860
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AA seq
1254 aa
AA seq
DB search
MPTAFSHRLPRWSWWLPLPLFHLGTWISLATRLNDGVALCYLPLVLGLVLCLWWGPRVLP
ALYLNALLSVPLWGLPWQWAPLYALPETVAVALGWWLLRRHSFDPALGSLADLLRFLAFG
VLAPAALVALGLQANLWLTGLQLGEHWAQASLAVWLNDAINLLALATPLLVFGSPLLRAR
GWLPESTAADAQALSISRSWRGWLLAFGIFLALMALVGSLPLLVALPFLGIGMLALALRY
AFAGALYGAVLVFAATLPLPLLRGDPGFAMLDLPRSQLQLAVLLLMGAALLVGRALGDLR
QALSRSARMQQQLARANLAMEASPLGVTIADARQPDLPLVYCNAAFTQITGYSADETLGR
NCRFLVADDHAQLELQPLRSALREGRSGHAVVRNYRKDGRPFWNEVVLAPMRDERGISHF
VGLQQDVTERVELAAQVEQQRAQLLRQNHLFSQTEDIANLGGWVFELGDSSMFWSDGCYR
IVERDIHLGPPSFEQALHYYDAPSQTLIIETLQAALGGLDEVDVELRLAARLGGRLVRVR
GMAERDDDGSLVRVYGVVQDISERKRTESQLRERDERLRLFFEAPLIGMALTTQSFGWEE
VNQKLCSILGRSRDELMASSWHQLSHPDDLAGEQARLEEVLLGSSDGFEMDKRFLRADGQ
VVFTRLSLRAVRGGAGRQTLFLLLVEDTSARREAEARYHTLVEHAPEAILLFSPEGGIVE
CNENALQLLRYRREDLLGKTIQSISPPRQADGSLSSRTGREHLQRAIAGDTPVFEWTHRD
SAGRQLPCEVRLVRMPGEELLIRASVLDISERQRYQREIERLAYSDELTGLPNRRLLLDR
LQHAMDRENREGSLGALLFIDLDHFKTVNDSLGHLIGDALLCEVTTRLARELRTEDTLAR
LGGDEFVVLLEALGSEPQAVAEHAAAVGEKLLRGLQGSCLIEGHELAISASIGIALHPLG
LQRAADILKQADTAMYRAKHAGRNALHFFAPEMQAAIDQRLQLQGELRQAIARQQLQLVF
QPQLVLADDTVAGAEVLLRWLHPERGEISPDQFIPLAEETGLIQDIGQWVLEQSCATLAR
WQAQWPQLVLAVNLSPRELRQAGCVARVEDCLRRHGVPAQALELEITEGVLLEDVDRCIG
NMQQLKAQGVRFAIDDFGTGYSSLTYLKRLPLDRLKIDRSFVADLDGDASGRMLVQTILM
IARNLDLECVAEGIEQPSQLALLREQGCALGQGYLFGKPMVEAEFLAWLQARQG
NT seq
3765 nt
NT seq
+upstream
nt +downstream
nt
atgcccaccgctttttcccaccgcctgcccagatggagctggtggctgccgctaccgctt
ttccacttgggaacctggatttctctggccacccgcctgaacgacggggtggccctgtgt
tacctgccgctggtgctgggcctggtgctgtgcctgtggtggggcccgcgcgtgctgccg
gcgctctacctcaacgccctgctcagcgtcccgttgtggggcctgccctggcaatgggcg
ccgctgtatgccttgcccgagacggtcgccgtggcgctgggctggtggttgttgcgacgc
cacagcttcgacccggccttgggcagcctggccgatctgctgcgttttctcgcattcggc
gtgctggcgccggcggcgctggtggcgttggggttgcaggccaacctgtggctgaccggc
ttgcagctcggcgagcactgggcgcaggccagcctggcggtgtggctgaacgacgccatc
aacctgctggcgctggccaccccgctgctggtgttcggcagcccgctgctgcgtgcgcgc
ggctggctgcccgagagcacggcggccgacgcgcaagccctgagcatcagccgttcctgg
cgcggctggctgctcgcgttcggcatcttcctggcgctgatggcactggtcggcagcctg
cctctgctggtcgctctgccctttctcggcatcggcatgctcgccctggccctgcgttat
gccttcgccggtgcgctttacggcgccgttctggtgttcgccgcgaccctgccgctgccg
ttgctgcgcggcgatcccggtttcgccatgctggatctgccgcgcagccagttgcagctg
gccgtgctgctgctgatgggcgccgccctgctggtagggcgggccctgggtgacctgcgc
caggcgctgagccgcagcgcgcgcatgcagcagcaactggcccgcgccaacctggcgatg
gaggccagcccgctgggggtgaccatcgccgacgcccgccagccggacctgccattggtc
tactgcaacgccgccttcacccagatcaccggctacagcgcagacgagacactggggcgc
aactgccgctttctcgttgccgacgaccacgcccagctggagctgcagcccctgcgcagc
gccttgcgcgaagggcgcagcgggcatgcggtggtgcgcaactaccgcaaggacggccgg
ccgttctggaacgaagtggtgctggcgccgatgcgcgacgagcggggcatcagccatttc
gtcggcctgcagcaggatgtcaccgaacgcgtggagctggcggcgcaggtcgagcagcag
cgcgcgcagctgttgcgccagaaccacctgttcagccagaccgaggacatcgccaacctc
ggcggctgggtgttcgaactcggcgattccagcatgttctggagcgatggctgctatcgc
atcgtcgagcgcgacatccatctggggccgccgagtttcgagcaggcgctgcactactac
gacgcgccgagccagacgctgatcatcgagaccctgcaggcggcgctgggcgggctggat
gaggtcgatgtggagctgcgtctggcggcgcgcctcggcgggcgcctggtgcgggtgcgc
ggcatggccgagcgcgacgatgacggcagcctggtgcgggtgtacggcgtggtgcaggac
atcagcgagcgcaagcgcaccgagtcgcaactgcgcgagcgcgacgagcgcctgcgtctg
ttcttcgaggcgccgctgatcggcatggcgctgactacccagagcttcggctgggaagag
gtcaaccagaagctgtgcagcatcctcgggcgtagccgcgacgagctgatggccagcagc
tggcaccagctgtcgcatcccgacgacctggcaggcgaacaggccaggctcgaggaggtg
ctgctgggcagcagcgacggtttcgagatggacaagcgcttcctgcgggccgacggccag
gtggtgttcactcgcctcagtctgcgtgcggtccgcggcggcgcaggccggcagacgctg
tttctgctgctggtggaagacaccagcgcgcggcgcgaggccgaggcgcgttaccacacc
ctggtcgagcacgcgcccgaggcgatcctgctgttcagcccggagggcggcatcgtcgag
tgcaacgagaacgcgctgcagctgctgcgttaccgccgcgaagacctgctgggcaagacc
atccagagcatcagcccgccgcgccaggcggacggcagtctgtcttcgcgcaccggcagg
gagcatctgcagcgggccatcgccggtgacacgccggtgttcgagtggacccatcgcgac
agtgccggacgccagctgccatgcgaggtgcgcctggtgcgcatgcccggcgaggagctg
ctgatccgcgccagcgtgctcgacatttccgagcgtcagcgctaccagcgcgagatcgag
cggctggcctacagcgacgagctgaccggtctgcccaatcgccgtctgctgctcgatcgc
ctgcagcacgccatggatcgcgagaaccgcgaaggcagcctgggcgcgctgctgttcatc
gacctggaccacttcaagacggtcaacgacagcctcggccacctgatcggcgatgcgctg
ctgtgcgaagtcaccacccgcctggctcgtgagctgcgtaccgaagacaccctggcgcgc
ctcggcggcgacgagttcgtggtgctgctcgaggcgctgggtagcgagccgcaggccgtt
gccgagcatgccgccgcggtgggcgagaagctgctgcgcgggctgcagggcagttgcctg
atcgaggggcacgagctggccatcagcgccagcatcggcatcgccctgcatccgctgggc
ctgcagcgcgccgccgatatcctcaagcaggccgacaccgccatgtaccgggccaagcat
gccggacgcaatgcgctgcacttcttcgccccggagatgcaggcggccatcgatcagcgt
ctgcagctgcagggcgagctgcgccaggccattgcccgtcagcaattgcaactggtgttc
cagccgcagctggtcctggccgacgacacggtggctggcgccgaggtgctgctgcgctgg
ctgcaccccgaacgcggcgagatttcccccgaccagttcattccgctggccgaggagacc
gggctgatccaggacatcggccagtgggtgctggagcagtcctgcgcgacgctggcgcgc
tggcaggcgcaatggccgcaactggtgctggcggtcaatctcagcccgcgcgagttgcgc
caggccggttgcgtggcgcgcgtcgaggattgcctgcgtcgccatggcgtacctgcgcag
gcgctggagctggaaatcaccgagggcgtgctgctggaggacgtcgaccgctgcatcggc
aacatgcagcagctcaaggcgcagggcgtgcgttttgccatcgacgacttcggcacgggc
tactcgtcgctcacctacctcaagcgcctgccgctggaccgcctgaagatcgaccgcagc
ttcgttgccgatctcgatggcgacgccagcgggcgcatgctggtgcagaccatcctgatg
atcgcgcgcaacctggatctcgaatgcgtggccgagggcatcgagcagcccagccagttg
gcgctgctgcgtgagcagggctgcgcgctgggccagggctatctgttcggcaagccgatg
gtcgaggccgagtttctcgcctggctgcaggcgcgccagggctga
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