Pseudomonas mendocina ymp: Pmen_1071
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Entry
Pmen_1071 CDS
T00510
Name
(GenBank) deoxyribodipyrimidine photo-lyase type I
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
pmy
Pseudomonas mendocina ymp
Brite
KEGG Orthology (KO) [BR:
pmy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pmy03400
]
Pmen_1071
Enzymes [BR:
pmy01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
Pmen_1071
DNA repair and recombination proteins [BR:
pmy03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
Pmen_1071
Prokaryotic type
Pmen_1071
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
ABP83838
UniProt:
A4XR72
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All DBs
Position
complement(1207957..1209390)
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AA seq
477 aa
AA seq
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MQQLMWFRSDLRIDDNTALSQAMSRGSTIALYLVTPGQWQRHDDAPCKVDFWLRNLAHLS
RALAALNVPLLIRQCEDWNQAPAVIAEVCHQHNVCAVHANEEYGINENLRDRCVAAYLAQ
QDIAWHSHLDQLLFKPGSILTRSGGYFQVYSQFRKVCYEHLHMALPGLVARPVAQAPTPL
ASDAIPHAVDGFAMPSEQLRSLWPAGEEAARQRLERFADEQIGYYKDERDFPALPGTSQL
SPYLAAGVLSPRQCLHAALAANRGEFDSGNAGVVTWVNELLWREFYKHILVGYPRVSRHR
AFRPETEAVAWRRAPEELAAWQQGRTGLPIIDAAMRQLLETGWMHNRLRMIVAMFLTKNL
LIDWREGERFFMRHLIDGDLAANNGGWQWSASTGTDAAPYFRIFNPISQSQKFDSEGRFI
RHWLPELAGLNKRDIHDPASLGGLFAPAGYPRPIVDLSRSRERALAAFRNLGQEVPA
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atgcagcaactgatgtggttccgcagcgacctgcggatcgatgacaacaccgcgctgagc
caggccatgagcaggggctcgaccatagcgctgtacctggtcacccccggccagtggcag
cgccatgacgatgccccgtgcaaggtcgacttctggctgcgcaacctggcccatctgagc
cgggcgctggccgccctcaacgtgccgttgctgattcgtcagtgcgaggactggaaccag
gcgccggccgtgatcgccgaggtctgccaccagcacaacgtctgcgcggtgcatgccaac
gaggagtacggcatcaacgaaaacctgcgcgaccgctgcgtggccgcctacctggcccag
caggacatcgcctggcacagccatctcgaccagctgctgttcaagcccggcagcatcctg
acccgctccggcggctacttccaggtctacagccagttccgcaaggtctgctacgagcac
ctgcacatggccctgcccggcctggtcgcccggcccgtggcgcaggcgcccacgcccctc
gccagcgacgcgattccccatgccgtggacggcttcgcgatgcccagcgagcagctgcgc
agcctctggccggccggcgaagaggccgcccgccagcgcctggagcgcttcgccgacgag
cagatcggctactacaaggacgaacgcgacttccccgcgctgcccggcaccagccagctc
tcgccctacctggcagccggcgtgctgtcgccgcgtcaatgcctgcacgccgcactggcc
gccaaccgcggcgagttcgacagcggcaatgcgggcgtcgtcacctgggtcaacgaactg
ctctggcgcgagttctacaagcacattctggtgggctacccgcgcgtctcgcggcatcgc
gccttccgcccggaaaccgaagccgtggcctggcgccgcgcgcccgaggaactggccgcc
tggcagcagggccgcaccggcctgccgatcatcgatgccgccatgcgccagctgctcgag
accggctggatgcacaaccgcctgcgcatgatcgtcgccatgttcctgaccaagaacctg
ctgatcgactggcgcgagggcgagcgcttcttcatgcgccacctgatcgacggcgacctg
gccgcgaacaatggcggctggcagtggagcgcctctaccggtaccgatgcggcgccctac
ttccgcatcttcaaccccatcagccagtcgcagaaattcgactccgagggacgcttcatc
cgccactggctgccggagctggccggcctgaacaagcgcgacatccatgacccggccagc
ctcggcgggctgttcgccccggccggctatccacggccgatcgtcgatctgtcgcgctcg
cgcgaacgcgccctggcggcgttcagaaacctcggccaggaggtgcccgcatga
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integrated database retrieval system