Pseudomonas mendocina ymp: Pmen_2039
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Entry
Pmen_2039 CDS
T00510
Name
(GenBank) transcriptional regulator, AsnC family
KO
K03719
Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
Organism
pmy
Pseudomonas mendocina ymp
Brite
KEGG Orthology (KO) [BR:
pmy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pmy03000
]
Pmen_2039
03036 Chromosome and associated proteins [BR:
pmy03036
]
Pmen_2039
Transcription factors [BR:
pmy03000
]
Prokaryotic type
Helix-turn-helix
Lrp/AsnC family
Pmen_2039
Chromosome and associated proteins [BR:
pmy03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
Pmen_2039
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AsnC_trans_reg
HTH_AsnC-type
HTH_24
HTH_IclR
HxlR
MarR_2
HTH_Crp_2
MarR
TrmB
HTH_36
HTH_10
HTH_20
HTH_63
LexA_DNA_bind
HTH_9
HTH_11
Fe_dep_repress
M11L
Motif
Other DBs
NCBI-ProteinID:
ABP84800
UniProt:
A4XTY4
LinkDB
All DBs
Position
complement(2253658..2254095)
Genome browser
AA seq
145 aa
AA seq
DB search
MTDEIDQTLIAALMEDSRRSLKALAQISGLSSPSVAERLRRLEERGVLKGYRVEIDPSHF
GYQLQAIVRVRPLPGKLHEVERLIQATPEFTECDKVTGEDCFIARLHVRSMEQLDEVLDR
INGHAETNTAIVKKTSVPRRLPPMN
NT seq
438 nt
NT seq
+upstream
nt +downstream
nt
atgaccgatgaaatcgaccagaccctgatcgccgccctgatggaagactcgcggcgctcc
ctgaaggccctggcgcagatcagtggcctgtcctcacccagcgtggccgagcgcctgcgg
cgtctggaagaacgcggcgtgctcaagggttacagagtggaaatcgatccaagccacttc
ggctatcagctgcaggccatcgttcgcgtgcgtccgctgcccggcaagctgcacgaggtg
gaacggctgatccaggccacgcccgagttcaccgaatgcgacaaggtcaccggcgaggac
tgcttcatcgcccgtctgcacgtgcgctcgatggagcaactggacgaggtgctcgaccgc
atcaacggccatgccgaaaccaacaccgccatcgtcaagaagacctcggtgccccgccgc
ctgcccccgatgaactga
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