KEGG   Pseudomonas mendocina ymp: Pmen_2194
Entry
Pmen_2194         CDS       T00510                                 
Name
(GenBank) DEAD/H associated domain protein
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
pmy  Pseudomonas mendocina ymp
Brite
KEGG Orthology (KO) [BR:pmy00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pmy03400]
    Pmen_2194
Enzymes [BR:pmy01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     Pmen_2194
    5.6.2.6  RNA 3'-5' helicase
     Pmen_2194
DNA repair and recombination proteins [BR:pmy03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    Pmen_2194
SSDB
Motif
Pfam: Lhr_WH DEAD_assoc DEAD Helicase_C ResIII
Other DBs
NCBI-ProteinID: ABP84954
UniProt: A4XUD8
LinkDB
Position
complement(2424508..2427120)
AA seq 870 aa
MDQPVSRRSLSGAWFAQCGWKPFAFQKEVWQAVKTGESGLLHASTGAGKTYALWFAALDR
FAPPSPAVTTRPRPRKKPVMAPLTVLWITPMRALAADTARALQAPLDDLQIPWDIGLRTG
DTSSAERARQSRKLPSTLITTPESLTLLLTRADAREAFAHLRMVVIDEWHELLGNKRGVQ
LQLALARLRLWHPSLLVWALSATLGNLEHAREVLMPAGRLVQGKLAKDLRIDSLLPAGLE
RFPWAGHLGLRMLPQVVEELEASSTALVFTNTRSQAESWYQALLEARPDWAGLLALHHGS
LSQEVRDWVELALKEGRLKAVVCTSSLDLGVDFLPVERVLQIGSPKGVARLMQRAGRSGH
APGRPSRATLVPTHSLEVLEAAAAQSAVAERKVEARLSPDKPLDVLVQHLVSMALGGGFH
ADAMLAEVRSAWAYRSLSDDEWQWALAFIRHGGHSLTAYPDYRRAEPDTSGLWQVPDARL
ARRHRMSIGTIVSDASLAVKYWSKGGSGGSLGSVEEGFIARLRPGDTFLFAGHPLELVRV
ENMTVYVRRATSRKAAIPRWNGGRMPLSSELADAVLAKLDAAAQEEYVGPEMQLLRPLLD
VQQAWSALPGAATLLAEVLKSREGWHLFLYPFAGRSVHLGLASLLAWRLAREQPLSVSIA
VNDYGLELLCPSEVDFAARLTPELFSTDDLLSDVLASLNAGELARRRFREIARIAGLVFS
GYPGAPKSTRQLQASSALFFDVFSQYDPGNLLLGQAQEEVLRQELDVQRLQHTLQRLQSR
RLDIRAVKRATPFAFPLLVERFRESLSSEKLADRIRRMVADLEQAAGPGGYQDPAFAIDD
ERPAPRKGRSPRQGKDGLPRPPAQRPKKRR
NT seq 2613 nt   +upstreamnt  +downstreamnt
atggatcaacccgttagccgccgcagcctgtccggcgcctggttcgcccagtgcggctgg
aagcccttcgcctttcagaaggaagtctggcaggcggtcaagacaggcgagtccggcctg
ctgcacgcctccaccggcgctggcaagacctacgccctgtggttcgcggccctggaccgt
ttcgcccccccctctcctgccgttaccaccagacctcgcccgcgtaaaaaaccggtcatg
gcgccgctgacggtgctgtggatcaccccgatgcgcgccctcgccgccgataccgcgcgc
gccctgcaggcgccgctggatgacctgcagattccctgggacatcggcctgcgcaccggc
gataccagtagcgccgaacgcgcgcggcagagccgcaagctgccgagtacgctgatcacc
acgccggaaagcctgaccctgctgctgacccgcgccgatgcccgcgaggccttcgcccac
ctgcgcatggtggtgatcgacgagtggcacgagctgctcggcaacaagcgcggcgtgcag
ctgcaactggccctcgcgcgcctgcgcctttggcatccgtcgctgctggtatgggcgctg
tccgctactctcggcaacctcgaacatgcccgcgaggtgctgatgcccgccgggcgcctg
gtgcagggcaagctggccaaggatctgcgcatcgacagcctgctgccggccggcctggag
cgctttccctgggccgggcatctgggactgcgcatgctgccgcaggtggtcgaggagctg
gaggccagcagcaccgcactggtgttcaccaacacccgctcgcaggcggaaagctggtac
caggccctgctcgaggcgcgcccggactgggccggcctgctcgccctgcaccacggctcg
ctgtcgcaggaggtgcgcgactgggtcgaactggcgctcaaggaaggccgactgaaagcc
gtggtctgcacctcgagcctagacctcggggtggatttcctgccggtggaacgagtgctg
cagatcggctcgcccaagggcgtggcccgtctcatgcagcgcgccggccgctccggccat
gccccggggcgcccgtcccgcgccacgctggtgcctacccatagcctggaagtgctggaa
gcggccgccgcgcaaagcgccgtggccgagcgcaaggtcgaggcacggctatcgccggac
aaaccgctcgacgtgctggtccagcacctggtgagcatggccctgggcggtggtttccac
gccgatgccatgctggccgaggtgcgcagcgcctgggcctaccgcagcctcagcgatgac
gagtggcagtgggcattggccttcatccgccacggcggccattcgctgaccgcctacccc
gattaccgccgcgccgagccggacaccagcggcctgtggcaggtgcccgatgcgcgcctg
gcgcggcggcaccgcatgagcatcggcaccatcgtcagcgacgccagcctggcggtgaaa
tactggagcaagggcggcagcggaggttctctgggcagcgtcgaggaaggtttcatcgcc
aggctgcgccccggcgataccttcctcttcgccggtcacccgctggaactggtgcgggtg
gaaaacatgaccgtctacgtgcgccgcgccaccagccgcaaggccgcgatcccgcgctgg
aacggcggacgcatgccgctctccagcgaactggcggacgccgtgctggccaagctcgac
gccgctgcccaggaagaatacgtcggtccggagatgcagttgctgcgcccattgctcgac
gtgcagcaggcctggtccgccctgcctggcgccgccaccctgctggcggaagtgctcaag
tcccgcgaaggctggcatctgttcctctaccccttcgccggtcgttcggtgcatctggga
ctggccagcctgctggcctggcgcctggcccgcgaacagccgctgagtgtttccattgcg
gtcaacgactatggcctggagctgctgtgccccagcgaggtggatttcgccgcacgactc
acgcccgagctgttcagcacggacgacttgctctccgatgtgctcgccagcctcaacgcc
ggcgaactggcgcgccggcgctttcgcgagatcgcccgcatcgccggcctggtgttcagc
ggctaccccggcgcgccgaagagcacccgccagctacaggcctccagtgcactgttcttc
gacgtgttcagccaatacgacccgggcaacctgctgctcggccaggcccaggaagaagtg
ctgcgccaggagctggacgtgcagcgcctgcaacacaccctgcagcgtctgcaatcgcgc
cggctggatatccgtgccgtcaagcgcgccacgccgttcgccttccccctgctggtggaa
cgctttcgcgaaagcctgagttcagagaaactcgctgaccgtatccggcgcatggtcgcc
gatctggaacaggccgccggcccgggtggttatcaggacccggcattcgccatcgacgac
gagcgcccggcgccgcgcaaaggccgctctccgcgtcagggcaaggacggcctgccgcgg
ccaccggcgcagcgcccgaaaaaacgccgctga

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