Pseudomonas nunensis: NK667_11885
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Entry
NK667_11885 CDS
T08997
Name
(GenBank) Ku protein
KO
K10979
DNA end-binding protein Ku
Organism
pnb
Pseudomonas nunensis
Pathway
pnb03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
pnb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
NK667_11885
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pnb03400
]
NK667_11885
DNA repair and recombination proteins [BR:
pnb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
NK667_11885
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
DDRGK
GLD3_KH3
Motif
Other DBs
NCBI-ProteinID:
UTO17011
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All DBs
Position
2773200..2774075
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AA seq
291 aa
AA seq
DB search
MARAIWKGAISFGLVHIPVALVSATSSHGVDFDWLDSRSMDPVGYKRVNKVTGKEVTKEH
IVKGVAYEKGRYVVLSEEEIRSAHPLSTQTIDIFAFVDSEQIPLQNIDTPYYLAPDKRGG
KVYALLRETLSKTNKVALAHVVLHTRQHLAALMPLESAMVLVMLRWPAEVRSLDELELGS
EVTKPELAKGELDMAKRLVEDMSADWKPEDYRDSFEDKIMALVEKKANEGKIEDVESAAG
EEERKTADVIDLTELLKRSLGGKAASKPAAKPRKAAAKPAPAKKATKSSRG
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atggcccgagcaatctggaaaggcgcaatcagttttggcttggtgcacatccctgtggca
ctggtgtcggcgacttcatctcatggggtggatttcgactggctcgacagccggagcatg
gacccggtgggctacaaacgcgtcaacaaagtcaccggcaaggaagtcaccaaggaacac
atcgtcaaaggcgtcgcctacgaaaagggccgctatgtggtgctcagcgaagaggaaatt
cgttcggcgcacccgttgtcgacccagaccatcgacatcttcgcctttgtcgacagcgaa
cagatcccgctgcaaaacatcgacacaccctattacttggcgccggacaaacgcggtggc
aaggtctatgcgctgctgcgtgaaaccctgagcaaaaccaacaaggtcgccctcgcccat
gtcgtgctgcatacccggcaacacctggcggcgctgatgccgctggaatcagcgatggtg
ttggtgatgctgcgctggccggcggaagtgcgcagcctcgatgaactggaattgggcagt
gaggtgaccaaacccgagctggccaagggtgaactggacatggccaagcggctggtcgag
gacatgagtgccgactggaaacccgaggattaccgcgacagtttcgaagacaagatcatg
gcgctggtggagaaaaaggccaatgaaggcaagatcgaggacgtcgagagcgccgccggc
gaagaggaacgtaaaactgcggatgtcattgatctgactgaactgctcaaacgcagcctc
ggtggcaaggcagccagcaaaccggcggccaagccgcgcaaagccgcggccaaaccggcc
ccggcgaaaaaagccacgaagagttcgcgtggctga
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