Pseudomonas nunensis: NK667_12875
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Entry
NK667_12875 CDS
T08997
Symbol
tssK
Name
(GenBank) type VI secretion system baseplate subunit TssK
KO
K11893
type VI secretion system protein ImpJ
Organism
pnb
Pseudomonas nunensis
Pathway
pnb02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
pnb00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
NK667_12875 (tssK)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pnb02044
]
NK667_12875 (tssK)
Secretion system [BR:
pnb02044
]
Type VI secretion system
Imp/Vas secretion system core components
NK667_12875 (tssK)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T6SS_VasE
Motif
Other DBs
NCBI-ProteinID:
UTO17199
LinkDB
All DBs
Position
complement(3010375..3011730)
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AA seq
451 aa
AA seq
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MKIDRPLWAAGALLSPQQFQQQARWEAWANEQLAHLTLAHPWGVQALGFDLEALRLGKLK
ATQLRLRMPDGTWVDTEQVDRLPSALELAQLLADVGQDVTVHLALPLEQANGNNCLFDGG
RADRPTRYRQSWREVQDIYADEVQSIGVLEHALSLRWQHDDNADYVTCPVARLVRDGQGA
WSLDPAYVPPLLSFAAHPGVVNQLDNLLTQLSTKRQRLMGMRRESNQRMADFAVADVSLF
WLLNALNTYQPVLANLREFPERHPEQVYQELIKLAGSLLTFSLEHDIDKVPKYRHETLEA
VFPPLMQTISLLLEASLPSRVIALALEERGANRWQVTLNDPRLREREGADFYLSVRCRLP
AAQLQDQFPRLCKIGTPDDVDYLINAALDGVPLQSLSHVPAAIPLRLENQYFALDLGHSK
GLAVLDAGVFAFYVPSTLLDVKLELFAVLRS
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atgaagatcgatcgtcctctatgggccgccggggcgttgctgtctccgcagcaattccag
cagcaggcgcgttgggaggcctgggccaacgaacagctcgctcatctgaccctggcgcac
ccttggggtgtccaggccttagggtttgacctggaggcattgcggctgggcaaactcaag
gcgactcaactgcgtctgcgaatgcccgacggcacgtgggtcgacaccgaacaggtggat
cgcctgccttccgccttggaactggcgcaactgctggcagacgttggtcaggatgtgaca
gtgcacttggccttgcctctggagcaggccaacggcaacaactgcctgtttgacgggggg
agagccgatcggccgacgcgctatcgtcagtcgtggcgcgaagtccaggacatttacgcg
gacgaagtccaatcgatcggcgtgttggagcatgcgctaagcctgcgttggcagcatgac
gacaacgcggattacgtgacatgccctgtcgcgcgtctggtacgggacgggcagggcgcc
tggagcctcgacccggcctatgtgccgccgctgctgagtttcgctgcacatcccggggtg
gtgaatcagttagataacctgttgacgcagctatccaccaaacgccagaggctcatggga
atgcgccgggagagcaatcagcgcatggccgattttgccgtggccgatgtgtcgctgttc
tggttgctcaatgccttgaatacctatcagcccgtgttggcgaacctgcgggagtttccc
gagcggcaccccgagcaggtctaccaagagttgatcaagttggcgggcagcttgctgacg
ttctctttggagcacgacatcgacaaagtgccaaagtaccggcacgagacattggaggcg
gtgttcccgccactgatgcagaccatttctctgttgctggaagccagtctaccgtcgcgg
gtcattgccttggcactggaggagcgtggggccaatcgctggcaggtcacactgaatgac
cctcgcttgcgcgagcgtgagggtgccgatttctatctgtcggtgcgctgccgtctgccg
gctgcgcagttgcaggatcagttcccgcgcttgtgcaagatcggcacgccggacgatgtc
gactacttgatcaacgcagcactcgacggtgtcccgctgcagtccctcagccatgtgccg
gcggcgattccgctgcgtctggaaaatcaatacttcgcgcttgatctcggtcattccaag
gggctagcagtgctggacgcgggggtcttcgctttctacgttccaagcaccttgctcgac
gtgaagcttgaactgtttgcggtgctgcgctcatga
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