Pseudomonas nunensis: NK667_19260
Help
Entry
NK667_19260 CDS
T08997
Name
(GenBank) sigma-54 dependent transcriptional regulator
KO
K10943
two-component system, response regulator FlrC
Organism
pnb
Pseudomonas nunensis
Pathway
pnb02020
Two-component system
pnb02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
pnb00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
NK667_19260
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
NK667_19260
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
pnb02022
]
NK667_19260
02035 Bacterial motility proteins [BR:
pnb02035
]
NK667_19260
Two-component system [BR:
pnb02022
]
Other families
FlrB-FlrC (polar flagellar synthesis)
NK667_19260
Bacterial motility proteins [BR:
pnb02035
]
Flagellar system
Flagellar assembly proteins
Others
NK667_19260
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
HTH_8
AAA_5
AAA_16
MCM
AAA
AAA_2
AAA_3
MerR
HTH_20
HTH_30
AAA_19
FleQ
HTH_24
nSTAND3
HTH_28
HTH_23
Sigma70_r4_2
HTH_11
DUF4055
AAA_22
HTH_17
DUF2249
HTH_1
Myosin_head
AAA_7
AAA_14
ATPase
HTH_Mga
Motif
Other DBs
NCBI-ProteinID:
UTO12306
LinkDB
All DBs
Position
complement(4404742..4406121)
Genome browser
AA seq
459 aa
AA seq
DB search
MAIKVLLVEDDRALREALADTLLLAGHDYKAVGSAEEALAAVGVEAFNLVVSDVNMPGMD
GHQLLGLLRARQPQLPVLLMTAHGAVERAVDAMRQGAADYLVKPFEPKALLDLVARHALG
NLGASDGEGPIAFEPASAQLLELAARVARSDSTVLISGESGTGKEVLARYIHQHSHRASQ
PFIAINCAAIPDNMLEATLFGHEKGSFTGAIAAQAGKFEQADGGTILLDEISEMPMGLQA
KLLRVLQEREVERVGARKPISLDIRVVATTNRDLAGEVAAGRFREDLYYRLSVFPLAWRP
LRERTADILPLAERLLAKHVNKMKHAAARLSPEAQACLIAYPWPGNVRELDNAIQRALIL
QQGGLIQPQDFCLSGPVACAPLPALAAVRVVEVEAESASALGDDLRRHEFQMIIDTLRSE
RGRRKEAAERLGISPRTLRYKLAQMRDAGMDVEAYLFAT
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atggcaatcaaggttctgctggtcgaggatgaccgcgcgctccgggaggcactggcggat
acgctgctgctcgcggggcacgattacaaggcggtcggttcggctgaagaagctttggcc
gcggtcggtgtcgaggcgttcaatctggtcgtgagcgacgtcaacatgccgggcatggac
ggccaccaactgcttggtttgttgcgggctcgacagccgcaattaccggtgctgctgatg
acggcgcacggcgcggtggagcgcgccgtcgatgcgatgcgccagggcgcggcggattat
ctggtcaagccgttcgagcccaaggctttgctcgatctggtggcgcggcatgcactgggc
aatctcggcgccagcgacggcgaaggcccgattgctttcgagccggccagtgcgcaactg
ctggaactggccgcccgtgtggcgcgcagcgattcgaccgtgttgatctccggcgagtcc
ggcaccggcaaggaagtgctggcgcgctatatccaccagcattcccatcgcgccagccag
ccgttcattgcaatcaactgcgcggcgatccccgacaacatgctcgaggccacgttgttc
ggccatgagaaaggctcgttcaccggcgccatcgccgcccaggccggcaagtttgaacag
gctgacggcgggaccatcctgctcgacgaaatttccgaaatgcccatgggccttcaggcc
aagttgctgcgcgtgttgcaggagcgtgaggtcgagcgggttggcgcgcgcaagccaatc
agcctggacattcgtgtggtcgccaccaccaaccgtgatctggccggtgaagtggcggcg
gggcgttttcgtgaagacctttactatcggctgtcggtttttccgctggcctggcgcccg
ctgcgcgagcgcaccgccgacatcctgccgctggccgagcgcctgttggccaaacacgtc
aataaaatgaagcacgcggcggcgagactgtcgccggaggcccaggcgtgcctgatcgct
tatccgtggccgggcaatgtccgggaactggataacgccatccagcgtgcgctgattctg
cagcagggtgggttgattcagccgcaggatttctgtctgtcagggccggtcgcttgtgcg
ccgttgcccgcgttggcagctgtgcgagtcgtggaagtcgaggctgaatcggccagcgcc
ctgggcgatgacctgcgccgccatgagtttcagatgatcatcgacaccttgcgttccgag
cgcggccggcgcaaagaagccgccgaacgcctgggcatcagcccgcgcaccttgcgctac
aagctggcgcaaatgcgtgatgcggggatggatgtagaagcctatttgtttgccacttga
DBGET
integrated database retrieval system
