Paenibacillus naphthalenovorans: IJ22_42860
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Entry
IJ22_42860 CDS
T04167
Name
(GenBank) subunit beta of DNA polymerase III
KO
K02338
DNA polymerase III subunit beta [EC:
2.7.7.7
]
Organism
pnp
Paenibacillus naphthalenovorans
Pathway
pnp03030
DNA replication
pnp03430
Mismatch repair
pnp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pnp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
IJ22_42860
03430 Mismatch repair
IJ22_42860
03440 Homologous recombination
IJ22_42860
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pnp03032
]
IJ22_42860
03400 DNA repair and recombination proteins [BR:
pnp03400
]
IJ22_42860
Enzymes [BR:
pnp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
IJ22_42860
DNA replication proteins [BR:
pnp03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
IJ22_42860
DNA repair and recombination proteins [BR:
pnp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
IJ22_42860
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_beta
DNA_pol3_beta_2
DNA_pol3_beta_3
Motif
Other DBs
NCBI-ProteinID:
ALS24573
UniProt:
A0A0U2WAT9
LinkDB
All DBs
Position
complement(4277244..4278386)
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AA seq
380 aa
AA seq
DB search
MKLTVLKQYLNESIGHVSKAISSRTTIPILNGIKIDVDSSGMILTASDTDISIQSFIPAE
DNEIQVIDLKQSGSVVLPSKFFVEIIRKLPAQQVEIEVKDHFQTTIRSGSSEIQLVGLDP
EEYPIMPGIEENKRIQIPSDLLKTMIKQTSFAVSTNEATPVLTGILWTITDGKLKFTACD
RHRLASRETNIDTEEGMTLNNVTISGKTLNELAKILPDQNTLIDVVFAENQVLFQINSIL
FYTRILEGTYPDTSKLIPQFYQTEIVVNTNELIDAIDRAYLLSREDKSNIVKLMMLEDQS
IEISSTSSELGKVTEELMTSSMKGELLRISFNSKYMLDALKVMDSEQIHIGFTGAMQPII
IRPNENSSLLQLILPYRTTG
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atgaaattaacggtactgaagcaatatttgaatgaatccatcggtcacgtttctaaagcc
atctcaagcagaacgaccattcccatcttaaacgggatcaaaatagacgtcgattccagc
ggaatgatactgacagccagcgataccgatatttcgatccaaagctttattcctgccgag
gataatgaaatacaggtcattgatcttaaacaatccggcagcgttgtccttccttccaaa
ttttttgtggagattatacgtaaactgccggcgcagcaggtagaaattgaggttaaagac
cattttcaaacgacgattcgttcgggttcatcggaaattcagcttgtgggtctcgatccg
gaggaatatccgattatgcccggcatcgaggagaataaacggatccaaattcctagcgac
ctgctgaaaacgatgatcaagcaaacttcgtttgccgtttcaacgaatgaagctactccc
gtgctcactggaattttatggaccattacagacggaaaactgaaattcaccgcatgtgac
cgtcaccggttagcgagccgcgaaacgaatatcgatacggaagaaggcatgacgcttaac
aatgtaaccatttccggaaaaacgttaaacgagcttgccaaaatattaccggaccagaac
acgctgatcgatgtcgtttttgccgaaaatcaagtgctgttccaaatcaattccatcttg
ttttatacccggattctagaagggacatatccggatacgtcgaagctcattccgcaattc
tatcaaacggaaattgtcgtcaatacgaatgaattgatcgatgcgattgaccgcgcctac
ctcctatccagagaggacaaaagcaacatcgtcaagctgatgatgcttgaggaccaatca
atcgagatttcttctacctcttctgagcttggaaaagtgaccgaagagttgatgacttca
agcatgaagggggaactgctgcgcatttcctttaactccaaatatatgctcgatgcctta
aaggtcatggacagcgaacagattcatatcggctttaccggcgctatgcagccgattatc
atcaggccgaatgagaactccagcctgctgcagctgatcctgccctaccggactacgggc
tag
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