Paenibacillus naphthalenovorans: IJ22_45680
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Entry
IJ22_45680 CDS
T04167
Name
(GenBank) DNA-directed RNA polymerase sigma-70 factor
KO
K27000
RNA polymerase sigma-H factor
Organism
pnp
Paenibacillus naphthalenovorans
Brite
KEGG Orthology (KO) [BR:
pnp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pnp03021
]
IJ22_45680
Transcription machinery [BR:
pnp03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
IJ22_45680
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
GerE
HTH_23
HTH_16
HTH_38
Sigma70_ECF
HTH_29
HTH_28
Motif
Other DBs
NCBI-ProteinID:
ALS24845
UniProt:
A0A0U2WBJ4
LinkDB
All DBs
Position
4559344..4559988
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AA seq
214 aa
AA seq
DB search
MSVDFKELRMDEYDLKADEDLVEAVREGNSDALEYLINKYKNFVRAKARSYFLIGADRED
IVQEGMIGLYKSIRDFRGEKLASFKAFAELCITRQIITAIKTATRQKHIPLNSYVSLDKP
IYDEDSDRTLLDVICGSRVSDPEELIINQEEFSGLEDKMGEILSDLERRVLMLYLDGRSY
QEIAVDLDRHVKSIDNALQRVKRKLERYLEVRDA
NT seq
645 nt
NT seq
+upstream
nt +downstream
nt
gtgagtgtcgacttcaaagagttgagaatggacgaatacgacctcaaggcagacgaagat
cttgtcgaagcggtccgtgaaggaaatagcgatgcactggagtacttgatcaacaagtat
aaaaactttgtccgcgccaaagcacgttcttattttttgatcggcgctgacagggaagac
atcgtgcaggaaggtatgatcggtctctataaatcgatccgcgatttccgcggagaaaag
ctcgcctcttttaaagcctttgccgaactctgtattacccgccaaatcatcacagcgatc
aaaaccgccacgcgccaaaagcatattcctctgaattcttacgtttcgctggacaagccc
atttatgatgaagattccgaccgtacactgcttgatgtgatctgcggttcccgggtatcc
gatccggaggagctgatcatcaatcaagaggagtttagcggacttgaagacaagatgggc
gagattttaagtgatctcgaacgtagagtgctgatgctgtatttggacggacgctcctat
caggagattgctgttgatttagaccgccatgtcaaatcgattgacaacgcgcttcaacgg
gtaaaacgcaagctcgaaaggtatttggaagtacgcgatgcataa
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