Pandoraea norimbergensis: AT302_02160
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Entry
AT302_02160 CDS
T04226
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
pnr
Pandoraea norimbergensis
Brite
KEGG Orthology (KO) [BR:
pnr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pnr03000
]
AT302_02160
Transcription factors [BR:
pnr03000
]
Prokaryotic type
Helix-turn-helix
Other families
AT302_02160
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
HTH_8
AAA_5
HTH_23
AAA_2
HTH_28
Mg_chelatase
DUF815
AAA_16
IstB_IS21
AAA
HTH_29
HTH_30
HTH_38
nSTAND3
AAA_7
AAA_3
HTH_1
Motif
Other DBs
NCBI-ProteinID:
ALS58760
UniProt:
A0A0U2WG59
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All DBs
Position
4852441..4853616
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AA seq
391 aa
AA seq
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MAPAPATAAQRQMRPDYLAIDDLSGTDARMRDLLARGKRFVDRGLPVLILGETGTGKEFL
ARALHAYSERRAQAFVAINTASIPEHLVESELFGYQRGAFSGALPGGMKGKLQQADGGTL
FLDEIGDMPYALQTRLLRVLSEREVTPLGASRAIPVDVQLICATHQDLASAVAQGKFRED
LYYRVAVGVLTLPTLHERDDKPELIARMLCDEWPGTRMDQALGRVSADAMTRLLSYAWPG
NLRQMRAALRYACAVMNGNVMRVDDLPPELAAAAMASRHSTMSAHDLPLREAAVLPMPMT
ASMSAVTRAASAQSASSSIAATATIAATEHDAPRMQERERILQALAQHRWNISAAARTLG
FCRASLYRKLKQLSIPHVRDCADALTSGHYA
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atggcgcccgcacctgccacggcggcccagcgccagatgcgccccgattacctcgccatc
gacgacctcagcggcaccgacgcccgcatgcgcgatctgctcgcgcgcggcaaacgcttc
gtcgatcgcggactgccggtactgattctcggtgagaccggaacgggtaaagagtttctc
gcccgtgcactgcacgcgtacagcgaacggcgcgcacaagcgttcgtcgcgatcaacacg
gcatcgattcccgaacatctggtcgagagcgaactgtttggctaccaacgcggggcgttc
tcgggcgcgttgcccggtggcatgaagggcaaactgcaacaagcggacggcggcacgctc
tttctcgatgaaatcggcgatatgccctacgccctgcaaacgcgattgttgcgtgtgctg
tcggaacgcgaagtcacgccgctgggcgcgagccgtgccattccggtcgacgtgcagttg
atttgtgcgacccatcaggatctcgcgagtgccgtggcgcaaggcaagttccgcgaagat
ttgtattaccgcgtcgccgtgggtgtgttgacgctccccacgctgcacgagcgcgacgat
aagcccgaactcattgcccgcatgctctgcgacgagtggcccggcacgcgcatggatcaa
gccctcggacgtgtgtcggcggacgccatgacgcgtctgctttcgtatgcatggcccggt
aacttgcggcagatgcgcgcggcactgcgctatgcgtgcgcggtgatgaatgggaatgtg
atgcgggtggacgatctgccgccagagttggcggcagcggcgatggcgtcacgccattcg
accatgagcgcacacgatttgccgttgcgagaggcggctgtattgccgatgccgatgacg
gcttcgatgtcggctgtcacgcgtgcggcctccgcgcagagtgcgtcatcgagcatcgca
gcgacggcaacgatcgccgcgaccgagcacgatgcgcctcgtatgcaggaacgtgaacgc
atcttgcaggcactcgcgcagcatcgctggaacatttctgcggcggcgcgcacgctcggt
ttttgccgcgcatcgctgtatcgcaagctcaagcaactgagcattccgcatgtgcgcgat
tgcgccgacgcgctgacgtcaggccattacgcgtga
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